FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n02_repeat-ITSChi472.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n02_repeat-ITSChi472.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3539
Sequences flagged as poor quality0
Sequence length301
%GC48

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCTGCGTTCTTCATCGATGCTGGAGCCAAGAGATCCGTTGTTAAAAGT80922.85956484882735No Hit
CGGCTGCGTTCTTCATCGATGCGAGTTACTTCCTCTAAATGACCAAGCCC77221.814071771686915No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT76821.70104549307714No Hit
CGGCTGCGTTCTTCATCGATGCCGACGATTACTTCCTCTAAATGACCAAG1474.1537157389092965No Hit
CGGCTGCGTTCTTCATCGATGCTGCCGACGATTACTTCCTCTAAATGACC1213.4190449279457478No Hit
CGGCTGCGTTCTTCATCGATGCAGTTACTTCCTCTAAATGACCAAGCCCT501.4128284826222097No Hit
CGGCTGCGTTCTTCATCGATGCGAGATACTTCCTCTAAATGACCAAGCCC471.3280587736648772No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGT421.186775925402656No Hit
CGGCTGCGTTCTTCATCGATGCTGCGTACTTCCTCTAAATGACCAAGCCC210.593387962701328No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGT160.4521051144391071No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT150.42384854478666295No Hit
CGGCTGCGTTCTTCATCGATGCCACGAGACTTACTTCCTCTAAATGACCA150.42384854478666295No Hit
CGGCTGCGTTCTTCATCGATGCGAGTTACTTCCTATAAATGACCAAGCCC140.3955919751342187No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACTTCCTCTAAATGACCAAGCCCT130.3673354054817745No Hit
CGGCTGCGTTCTTCATCGATGCTGCTTACTTCCTCTAAATGACCAAGCCC110.31082226617688613No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGT100.2825656965244419No Hit
CGGCTGCGTTCTTCATCGATGCTGGAGCCGAGAGATCCGTTGTTAAAAGT90.2543091268719977No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCGAGAGATCCGTTGTTGAAAGT90.2543091268719977No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAGAGT80.22605255721955356No Hit
CGGCTGCGTTCTTCATCGATGCAGATACTTCCTCTAAATGACCAAGCCCT80.22605255721955356No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGCTGAAAGT70.19779598756710934No Hit
CGGCTGCGTTCTTCATCGATGCTGGAGCCAAGAGGTCCGTTGTTAAAAGT60.16953941791466515No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGTTCCGTTGTTGAAAGT60.16953941791466515No Hit
CGGCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGT60.16953941791466515No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGGAAGT60.16953941791466515No Hit
CGGCTGCGTTCTTCATCGATGCTAGAGCCAAGAGATCCGTTGTTAAAAGT60.16953941791466515No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGGGATCCGTTGTTGAAAGT50.14128284826222096No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGAAAGT50.14128284826222096No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGT50.14128284826222096No Hit
CGGCTGCGTTCTTCATCGATGCTAGAACCAAGAGATCCGTTGTTGAAAGT50.14128284826222096No Hit
CGGCTGCGTTCTTCATCGATGCAGGAGCCAAGAGATCCGTTGTTAAAAGT50.14128284826222096No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAGGT50.14128284826222096No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTCGTTGAAAGT40.11302627860977678No Hit
CGGCTGCGTTCTTCATCGATGCGAGTTACTTCCTCTACATGACCAAGCCC40.11302627860977678No Hit
CGGCTGCGTTCTTCATCGATGCGGGTTACTTCCTCTAAATGACCAAGCCC40.11302627860977678No Hit
CGGCTGCGTTCTTCATCGATGCGAGATACTTCCTATAAATGACCAAGCCC40.11302627860977678No Hit
AGGCTGCGTTCTTCATCGATGCGAGTTACTTCCTCTAAATGACCAAGCCC40.11302627860977678No Hit
CGGCTGCGTTCTTCATCGATGCTGGAGCCAAGAGATCCGTTGTTGAAAGT40.11302627860977678No Hit
CGGCTGCGTTCTTCATTGATGCTGGAGCCAAGAGATCCGTTGTTAAAAGT40.11302627860977678No Hit
CGGCTGCGTTCTTCATCGATGCTGGAGCCAAGAGATCCGCTGTTAAAAGT40.11302627860977678No Hit
CGGCTGCGTTCTTCATCGATGCCGACGATTACTTCTTCTAAATGACCAAG40.11302627860977678No Hit
CGGCTGCGTTCTTTATCGATGCGAGTTACTTCCTCTAAATGACCAAGCCC40.11302627860977678No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)