FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n02_repeat-ITSChi469.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n02_repeat-ITSChi469.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences67
Sequences flagged as poor quality0
Sequence length301
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGT1623.88059701492537No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGAAAGT811.940298507462686No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGT710.44776119402985No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT57.462686567164178No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCCGAAAGT57.462686567164178No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGT45.970149253731343No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGT34.477611940298507No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT34.477611940298507No Hit
AGCCTAGACATCCACTGCTGAAGGTTGTTATCTAGAATAAAAGCAGAGAC22.9850746268656714No Hit
CGGCTGCGTTTTCCTTCGTTCCCCAACCCAAGAGATCCGTTTTTGAAGGT11.4925373134328357No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGCCGAAAGT11.4925373134328357No Hit
CGGCTCCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT11.4925373134328357No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGACAGT11.4925373134328357No Hit
CGTCTGCGTTCTTCATCGATGCCAGAGCCAAAAGATCCATTGTTCAAAGA11.4925373134328357No Hit
CGGCTGAGTTCTTCATCGAGGCGCAAGCCAAGAGATCCGTTGTTGAAAGT11.4925373134328357No Hit
CGGCTGCGTTCTTTATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT11.4925373134328357No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACTAAGAGATCCGTTGTTGAAAGT11.4925373134328357No Hit
AGGATGCGTTCTTTATCGATGCAAGAAACAAGAGATCCGATGGTGAAAGA11.4925373134328357No Hit
CGGCTGCGTTCTTCATCGATGCGCGAGCCAAGAGATCCGTTGTTGAAAGT11.4925373134328357No Hit
CGGCTGCGTTCTTCATCGATGCGCAAACCAAGAGATCCGTTGTTGAAAGT11.4925373134328357No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCGAGAGATCCGTTGTTGAAAGT11.4925373134328357No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGCTCCGTTGTTAAACGT11.4925373134328357No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGGGATCCGTTGTTGAAAGT11.4925373134328357No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)