FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n02_repeat-ITSChi450.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n02_repeat-ITSChi450.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11217
Sequences flagged as poor quality0
Sequence length301
%GC46

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT485943.31817776589106No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGT324128.893643576713917No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGT4594.092003209414282No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGT3142.7993224569849335No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT2051.8275831327449408No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGT1961.7473477756976017No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGAAAGT820.7310332530979763No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGT600.5349023803155925No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTAAAAGT360.32094142818935545No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGGTCCGTTGTTGAAAGT310.2763662298297227No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGGAAGT280.24962111081394314No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAGGT280.24962111081394314No Hit
CGGCTGCGTTCTTCATCGATGCCAAAACCAAGAGATCCGTTGTTGAAAGT260.23179103147009006No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAGAGT250.2228759917981635No Hit
CGGCTGCGTTCTTCATCGATGCCAGGACCAAGAGATCCGTTGTTGAAAGT250.2228759917981635No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGGGATCCGTTGTTGAAAGT220.19613087278238386No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGTTCCGTTGTTGAAAGT210.18721583311045736No Hit
CGGCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGT210.18721583311045736No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGGTCCGTTGTTAAAAGT200.17830079343853078No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGCTGAAAGT200.17830079343853078No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGC190.16938575376660425No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGCTCCGTTGTTGAAAGT190.16938575376660425No Hit
CGGCTGCGTTCTTCATCGATGCGAGGGCCAAGAGATCCGTTGTTAAAAGT180.16047071409467772No Hit
CGGCTGCGTTCTTCATCGATGCTGACGATTACTTCCTCTAAATGACCAAG180.16047071409467772No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGTTCCGTTGTTAAAAGT180.16047071409467772No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGACCCGTTGTTGAAAGT180.16047071409467772No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTCGAAAGT170.15155567442275117No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGCTGTTAAAAGT160.14264063475082464No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGT160.14264063475082464No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAGGAGATCCGTTGTTGAAAGT160.14264063475082464No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAGGT160.14264063475082464No Hit
CGGCTGCGTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTT150.1337255950788981No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTCGTTAAAAGT150.1337255950788981No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGC140.12481055540697157No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGGGATCCGTTGTTAAAAGT140.12481055540697157No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGCTCCGTTGTTAAAAGT130.11589551573504503No Hit
CGGCTGCGTTCTTTATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT130.11589551573504503No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCGAGAGATCCGTTGTTAAAAGT130.11589551573504503No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAGAGT130.11589551573504503No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGACCCGTTGTTAAAAGT130.11589551573504503No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCATTGTTGAAAGT120.10698047606311847No Hit
CGGCTGCGTTCTTCATCGATGCGAGTTACTTCCTCTAAATGACCAAGCCC120.10698047606311847No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCGAGAGATCCGTTGTTGAAAGT120.10698047606311847No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGCTGTTGAAAGT120.10698047606311847No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)