FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n02_repeat-ITSChi436.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n02_repeat-ITSChi436.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12452
Sequences flagged as poor quality0
Sequence length301
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGT320025.698682942499197No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGAAAGT295923.763250883392224No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGT198715.957275939608095No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGT9587.6935432059106965No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT4793.8467716029553483No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGT4373.5094763893350462No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT1391.1162865403148088No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTAAAAGT640.513973658849984No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGT570.45775778991326693No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTAAAAGT550.441696113074205No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCCGAAAGT540.4336652746546739No Hit
CGGCTGCGTTCTTCATCGATGCGCGAGCCAAGAGATCCGTTGTTGAAAGT250.20077096048827497No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAAATCCGTTGCTGAAAGT240.19274012206874397No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGGTCCGTTGTTGAAAGT230.18470928364921296No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGC190.152585929971089No Hit
CGGCTGCGTTCTTCATCGATGCGGGAGCCAAGAGATCCGTTGTTAAAAGT190.152585929971089No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTAAAAGT190.152585929971089No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGGTCCGTTGTTAAAAGT180.144555091551558No Hit
CGGCTGCGTTCTTCATCGATGCGAGGGCCAAGAGATCCGTTGTTAAAAGT180.144555091551558No Hit
CGGCTGCGTTCTTCATCGATGCGCGAGCCAAGAGATCCGTTGTTAAAAGT170.13652425313202698No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGCTGTTAAAAGT170.13652425313202698No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGTTCCGTTGTTGAAAGT160.128493414712496No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAGGT160.128493414712496No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGGTCCGTTGTTGAAAGT160.128493414712496No Hit
CGGCTGCGTTCTTCATCGATGCGCCAGCCAAGAGATCCGTTGTTGAAAGT160.128493414712496No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGACCCGTTGTTGAAAGT160.128493414712496No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCATTGTTGAAAGT150.12046257629296497No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGGGATCCGTTGTTGAAAGT150.12046257629296497No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAGAGT150.12046257629296497No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGT150.12046257629296497No Hit
CGGCTGCGTTCTTTATCGATGCGCAAGCCAAGAGATCCGTTGTTGAAAGT150.12046257629296497No Hit
CGGCTGCGTTCTTTATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGT140.11243173787343398No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGGGATCCGTTGTTAAAAGT130.10440089945390298No Hit
CGGCTGCGTTCTTCATCGATGCGCAGGCCAAGAGATCCGTTGTTGAAAGT130.10440089945390298No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAGAAGT130.10440089945390298No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGACCCGTTGTTGAAAGT130.10440089945390298No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)