FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n02_repeat-ITSChi434.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n02_repeat-ITSChi434.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19146
Sequences flagged as poor quality0
Sequence length301
%GC52

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT1078656.33552700302935No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGT239212.493471221142798No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGAAAGT19079.960305024548209No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGT2051.070719732581218No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGT1910.9975974093805495No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGT1470.7677843936070197No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT770.402172777603677No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGCTGAAAGT690.3603885929175807No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGGTCCGTTGTTGAAAGT640.3342734774887705No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGGGATCCGTTGTTGAAAGT610.3186044082314844No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGTTCCGTTGTTGAAAGT600.31338138514572234No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAGAGT530.2768202235453881No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGC520.27159720045962604No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGGAAGT520.27159720045962604No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGCTGTTGAAAGT470.24548208503081584No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGCTCCGTTGTTGAAAGT460.24025906194505378No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTCGTTGAAAGT460.24025906194505378No Hit
CGGCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGT450.23503603885929175No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAGGT440.22981301577352972No Hit
CGGCTGCGTTCTTCATCGATGCCAAAACCAAGAGATCCGTTGTTGAAAGT430.22458999268776766No Hit
CGGCTGCGTTCTTCATCGATGCCAGGACCAAGAGATCCGTTGTTGAAAGT420.21936696960200563No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCGAGAGATCCGTTGTTGAAAGT420.21936696960200563No Hit
CGGCTGCGTTCTTTATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT400.20892092343048155No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTCGAAAGT390.20369790034471952No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGACCCGTTGTTGAAAGT390.20369790034471952No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTAAAAGT380.1984748772589575No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAGGAGATCCGTTGTTGAAAGT320.16713673874438525No Hit
CGGCTGCGTTCTTCATCGATGCAGAACCAAGAGATCCGTTGTTGAAAGTT290.15146766948709914No Hit
CGGCTGTGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT280.1462446464013371No Hit
AGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT250.130575577144051No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAAAGATCCGTTGTTGAAAGT250.130575577144051No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCTGTTGTTGAAAGT200.10446046171524077No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)