FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n02_repeat-ITSChi423.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n02_repeat-ITSChi423.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10426
Sequences flagged as poor quality0
Sequence length301
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCTGCGTTCTTCATCGATGCAAGAGCCAAGAGATCCGTTGTTAAAAGT211920.32418952618454No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGAAAGT199519.13485516976789No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT133012.756570113178592No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGT117311.25071935545751No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT7276.972952234797622No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGT6185.927488969882985No Hit
CGGCTGCGTTCTTCATCGATGCGAGTTACTTCCTCTAAATGACCAAGCCC980.9399577978131594No Hit
CGGCTGCGTTCTTCATCGATGCAGGAGCCAAGAGATCCGTTGTTAAAAGT980.9399577978131594No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGT590.5658929599079224No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTAAAAGT410.3932476501055055No Hit
CGGCTGCGTTCTTCATCGATGCAAGAGCCAAGAGATCCGTTGTTGAAAGT400.3836562440053712No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTAAAAGT350.3356992135046998No Hit
CGGCTGCGTTCTTCATCGATGCAAGAGCCAAGAGATCCGTTGTTAAAGGT340.3261078074045655No Hit
CGGCTGCGTTCTTCATCGATGCAAGAGCCAGAGATCCGTTGTTTCATATT320.30692499520429695No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGT290.2781507769038941No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGT280.2685593708037598No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGTTCCGTTGTTGAAAGT210.20141952810281988No Hit
CGGCTGCGTTCTTCATCGATGCTGGAGCCAAGAGATCCGTTGTTAAAAGT180.17264530980241705No Hit
CGGCTGCGTTCTTCATCGATGCAAGAGCCAAGGGATCCGTTGTTAAAAGT170.16305390370228276No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGGGATCCGTTGTTGAAAGT160.15346249760214847No Hit
CGGCTGCGTTCTTCATCGATGCGCGAGCCAAGAGATCCGTTGTTGAAAGT150.1438710915020142No Hit
CGGCTGCGTTCTTCATCGATGCAAGAGCCAAGAGTTCCGTTGTTAAAAGT150.1438710915020142No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTCGTTGAAAGT140.1342796854018799No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGGTCCGTTGTTGAAAGT140.1342796854018799No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGGTCCGTTGTTGAAAGT140.1342796854018799No Hit
CGGCTGCGTTCTTTATCGATGCGCAAGCCAAGAGATCCGTTGTTGAAAGT140.1342796854018799No Hit
CGGCTGCGTTCTTCATCGATGCAAGGGCCAAGAGATCCGTTGTTAAAAGT140.1342796854018799No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGAAAGC130.12468827930174563No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGAAGGT130.12468827930174563No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGCTGAAAGT130.12468827930174563No Hit
CGGCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGT130.12468827930174563No Hit
CGGCTGCGTTCTTCATCGATGCGCCAGCCAAGAGATCCGTTGTTGAAAGT130.12468827930174563No Hit
CGGCTGCGTTCTTCATCGATGCAAGAGCCAAGAGACCCGTTGTTAAAAGT120.11509687320161135No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGGGATCCGTTGTTGAAAGT110.10550546710147708No Hit
CGGCTGCGTTCTTCATCGATGCAAGAGCCGAGAGATCCGTTGTTAAAAGT110.10550546710147708No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)