FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n02_repeat-ITSChi416.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n02_repeat-ITSChi416.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10700
Sequences flagged as poor quality0
Sequence length301
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGAAAGT438741.0No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGT158114.775700934579438No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGT8728.149532710280374No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT8127.5887850467289715No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGT4694.383177570093458No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT4454.158878504672897No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGT1681.5700934579439254No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTAAAAGT480.4485981308411215No Hit
CGGCTGCGTTCTTCATCGATGCGAGTTACTTCCTCTAAATGACCAAGCCC400.3738317757009346No Hit
CGGCTGCGTTCTTCATCGATGCGCCAGCCAAGAGATCCGTTGTTGAAAGT360.3364485981308411No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCATTGTTGAAAGT320.29906542056074764No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGGTCCGTTGTTGAAAGT300.2803738317757009No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGAAGGT300.2803738317757009No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGAGAGT300.2803738317757009No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGGGATCCGTTGTTGAAAGT280.26168224299065423No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGAAAGC240.22429906542056074No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTAAAAGT240.22429906542056074No Hit
CGGCTGCGTTCTTCATCGATGCGCGAGCCAAGAGATCCGTTGTTGAAAGT220.205607476635514No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGTTCCGTTGTTGAAAGT220.205607476635514No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGGAAGT220.205607476635514No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTCGTTGAAAGT210.19626168224299068No Hit
CGGCTGCGTTCTTCATCGATGCGCAGGCCAAGAGATCCGTTGTTGAAAGT200.1869158878504673No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCATTGTTGAAAGT190.17757009345794392No Hit
CGGCTGCGTTCTTTATCGATGCGCAAGCCAAGAGATCCGTTGTTGAAAGT190.17757009345794392No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGT190.17757009345794392No Hit
CGGCTGCGTTCTTCATCGATGCACAAGCCAAGAGATCCGTTGTTGAAAGT170.1588785046728972No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAGGAGATCCGTTGTTGAAAGT150.14018691588785046No Hit
CGGCTGCGTTCTTCATCGATGCTGGAGCCAAGAGATCCGTTGTTAAAAGT140.13084112149532712No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGCTGTTGAAAGT140.13084112149532712No Hit
CGGCTGCGTTCTTCATTGATGCGCAAGCCAAGAGATCCGTTGTTGAAAGT130.12149532710280374No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTCGAAAGT130.12149532710280374No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCTGTTGTTGAAAGT120.11214953271028037No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGCTGAAAGT120.11214953271028037No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGCTCCGTTGTTGAAAGT120.11214953271028037No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGACCCGTTGTTGAAAGT120.11214953271028037No Hit
CGGCTGCGTTCTTCATCGATGCGAAAGCCAAGAGATCCGTTGTTGAAAGT110.102803738317757No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCGAGAGATCCGTTGTTGAAAGT110.102803738317757No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)