FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n02_repeat-ITSChi388.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n02_repeat-ITSChi388.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10605
Sequences flagged as poor quality0
Sequence length301
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT419639.566242338519565No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGT201118.962753418198965No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGT6215.855728429985856No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGAAAGT4564.2998585572843No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGT3813.592644978783593No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGT3012.838283828382838No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAAATCCGTTGCTGAAAGT1161.0938236680810938No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCCGAAAGT1101.0372465818010372No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGT1000.942951438000943No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT990.9335219236209336No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGT670.6317774634606318No Hit
CGGCTGCGTTCTTCATCGATGCGAGTTACTTCCTCTAAATGACCAAGCCC630.594059405940594No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCATTGTTGAAAGT580.5469118340405469No Hit
CGGCTGCGTTCTTCATCGATGCCAGTACCAAGAGATCCGTTGTTGAAAGT510.48090523338048086No Hit
CGGCTGCGTTCTTCATCGATGCTAGAACCAAGAGATCCGTTGTTAAAAGT490.46204620462046203No Hit
CGGCTGCGTTCTTCATCGATGCGGGAGCCAAGAGATCCGTTGTTGAAAGT410.38661008958038656No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGGTCCGTTGTTGAAAGT340.3206034889203206No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGGAAGT260.24516737388024518No Hit
CGGCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGT220.20744931636020744No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAGAGT200.1885902876001886No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAGGAGATCCGTTGTTGAAAGT200.1885902876001886No Hit
CGGCTGCGTTCTTCATCGATGCCAGGACCAAGAGATCCGTTGTTGAAAGT190.17916077322017915No Hit
CGGCTGCGTTCTTCATCGATGCCAAAACCAAGAGATCCGTTGTTGAAAGT190.17916077322017915No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGGGATCCGTTGTTGAAAGT180.16973125884016974No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGGTCCGTTGTTAAAAGT180.16973125884016974No Hit
CGGCTGCGTTCTTCATCGATGCTAGAACCAAGAGATCCGTTGTTGAAAGT180.16973125884016974No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTCGAAAGT170.1603017444601603No Hit
CGGCTGCGTTCTTCATCGATGCCGGAGCCAAGAGATCCATTGTTAAAAGT160.15087223008015088No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGC160.15087223008015088No Hit
CGGCTGCGTTCTTCATCGATGCTGCCGACGATTACTTCCTCTAAATGACC150.14144271570014144No Hit
CGGCTGCGTTCTTTATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT150.14144271570014144No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGACCCGTTGTTGAAAGT150.14144271570014144No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCTGTTGTTGAAAGT140.132013201320132No Hit
AGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT140.132013201320132No Hit
AGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGT130.12258368694012259No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAGGT130.12258368694012259No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTCGTTGAAAGT130.12258368694012259No Hit
CGGCTGCGTTCTTCATCGATGCGGGAGCCAAGAGATCCGTTGTTAAAAGT130.12258368694012259No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTAAAAGT130.12258368694012259No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGGGATCCGTTGTTAAAAGT120.11315417256011315No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGCTGAAAGT120.11315417256011315No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGCTCCGTTGTTGAAAGT120.11315417256011315No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCATTGCTGAAAGT120.11315417256011315No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTAAAAGT120.11315417256011315No Hit
CGGCTGCGTTCTTCATCGATGCCCGAACCAAGAGATCCGTTGTTGAAAGT110.10372465818010372No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCGAGAGATCCGTTGTTGAAAGT110.10372465818010372No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTCGTTAAAAGT110.10372465818010372No Hit
CGGCTGCGTTCTTCATCGATGCGTGAGCCAAGAGATCCGTTGTTGAAAGT110.10372465818010372No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)