FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n02_repeat-ITSATH380.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n02_repeat-ITSATH380.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12488
Sequences flagged as poor quality0
Sequence length301
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGT648951.96188340807175No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT133710.70627802690583No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGT10638.512171684817424No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT8236.590326713645099No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAACT2151.7216527866752083No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGT1961.5695067264573992No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGAAAGT1401.1210762331838564No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTAAAAGT1120.8968609865470852No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGT1050.8408071748878924No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTAAAAGT580.46444586803331195No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGT460.3683536194746957No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAGGT350.2802690582959641No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGTTCCGTTGTTAAAAGT340.27226137091607944No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGGTCCGTTGTTAAAAGT320.25624599615631005No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGGGATCCGTTGTTAAAAGT300.2402306213965407No Hit
CGGCTGCGTTCTTCATCGATGCAAGAGCCAAGAGATCCATTGTTAAAAGT290.23222293401665597No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAGGT290.23222293401665597No Hit
CGGCTGCGTTCTTCATCGATGCGAGGGCCAAGAGATCCGTTGTTAAAAGT280.2242152466367713No Hit
CGGCTGCGTTCTTCATCGATGCGAAAGCCAAGAGATCCGTTGTTAAAAGT250.20019218449711723No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGCTCCGTTGTTAAAAGT240.19218449711723257No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGACCCGTTGTTAAAAGT240.19218449711723257No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGCTGTTAAAAGT230.18417680973734785No Hit
CGGCTGCGTTCTTCATCGATGCGGGAGCCAAGAGATCCGTTGTTAAAAGT230.18417680973734785No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAGGAGATCCGTTGTTAAAAGT210.1681614349775785No Hit
CGGCTGCGTTCTTCATCGATGCAAGAGCCAAGAGATCCGTTGTTAAAAGT210.1681614349775785No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCGAGAGATCCGTTGTTAAAAGT210.1681614349775785No Hit
CGGCTGCGTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGTT200.1601537475976938No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCATTGTTAAAAGT190.15214606021780908No Hit
CGGCTGCGTTCTTTATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGT180.1441383728379244No Hit
CGGCTGCGTTCTTCATCAATGCGAGAGCCAAGAGATCCGTTGTTAAAAGT170.13613068545803972No Hit
AGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGT170.13613068545803972No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTAAAAGT170.13613068545803972No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTCGTTAAAAGT160.12812299807815503No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGTCAAGAGATCCGTTGTTAAAAGT150.12011531069827035No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAGAAGT140.11210762331838565No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAGAGT140.11210762331838565No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCATTGTTAAAAGT140.11210762331838565No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGC130.10409993593850095No Hit
CGGCTGCGTTCTTCATCGATGCGCGAGCCAAGAGATCCGTTGTTAAAAGT130.10409993593850095No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)