FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n02_repeat-ITSATH375.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n02_repeat-ITSATH375.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14642
Sequences flagged as poor quality0
Sequence length301
%GC51

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCTGCGTTCTTCATCGATGCGGGAACCAAGAGATCCGTTGTTGAAAGT550737.61098210626964No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGT409927.994809452260622No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT169711.58994672858899No Hit
CGGCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGT1801.2293402540636524No Hit
CGGCTGCGTTCTTCATCGATGCGGGAACCAAGAGATCCGTTGTTAAAAGT1531.0449392159541047No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT940.6419887993443518No Hit
CGGCTGCGTTCTTCATCGATGCTGGAACCAAGAGATCCGTTGTTGAAAGT740.5053954377817238No Hit
CGGCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTAAAAGT640.43709875700040973No Hit
CGGCTGCGTTCTTCATCGATGCGAGTTACTTCCTCTAAATGACCAAGCCC590.4029504166097528No Hit
CGGCTGCGTTCTTCATCGATGCTGGAACCAAGAGATCCGTCGTTGGTAGT510.3483130719847015No Hit
CGGCTGCGTTCTTCATCGATGCGGGAACCAAGAGATCCGTTGTTGAAGGT410.2800163912033875No Hit
CGGCTGCGTTCTTCATCGATGCGGGAACCAAGAGGTCCGTTGTTGAAAGT400.2731867231252561No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGT380.2595273869689933No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGT360.2458680508127305No Hit
CGGCTGCGTTCTTCATCGATGCGGGAGCCAAGAGATCCGTTGTTGAAAGT360.2458680508127305No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTAAAAGT340.2322087146564677No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGGTCCGTTGTTAAAAGT330.22537904657833632No Hit
CGGCTGCGTTCTTCATCGATGCGGGAACCAAGGGATCCGTTGTTGAAAGT310.2117197104220735No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAGGT310.2117197104220735No Hit
CGGCTGCGTTCTTCATCGATGCGGGAACCAAGAGATCCGTTGTTGGAAGT290.1980603742658107No Hit
CGGCTGCGTTCTTCATCGATGCGGGAACCAGGAGATCCGTTGTTGAAAGT280.1912307061876793No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGGGATCCGTTGTTAAAAGT280.1912307061876793No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGC270.1844010381095479No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTCGTTAAAAGT250.17074170195328509No Hit
CGGCTGCGTTCTTTATCGATGCGGGAACCAAGAGATCCGTTGTTGAAAGT250.17074170195328509No Hit
AGGCTGCGTTCTTCATCGATGCGGGAACCAAGAGATCCGTTGTTGAAAGT250.17074170195328509No Hit
CGGCTGCGTTCTTCATCGATGCGGGAACCGAGAGATCCGTTGTTGAAAGT250.17074170195328509No Hit
CGGCTGCGTTCTTCATCGATGCGGGAACCAAGAGATCCGTCGTTGAAAGT240.16391203387515366No Hit
CGGCTGCGTTCTTCATCGATGCGGGAACCAAGAGATCCGCTGTTGAAAGT240.16391203387515366No Hit
CGGCTGCGTTCTTCATCGATGCGGGAACCAAGAGTTCCGTTGTTGAAAGT240.16391203387515366No Hit
CGGCTGCGTTCTTCATCGATGCGGGAACCAAGAGATCCGTTGTCGAAAGT240.16391203387515366No Hit
CGGCTGCGTTCTTCATCGATGCGGGAACCAAGAGATCCGTTGCTGAAAGT220.15025269771889088No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGT220.15025269771889088No Hit
CGGCTGCGTTCTTCATCGATGCGGGGACCAAGAGATCCGTTGTTGAAAGT210.14342302964075945No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAGGAGATCCGTTGTTAAAAGT210.14342302964075945No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGCTGTTAAAAGT190.12976369348449665No Hit
CGGCTGCGTTCTTCATCGATGCGGGAACCAAGAGATCCGTTGTTGAAAGC190.12976369348449665No Hit
CGGCTGCGTTCTTCATCGATGCGGGAACCAAGAGCTCCGTTGTTGAAAGT180.12293402540636525No Hit
CGGCTGCGTTCTTCATCGATGCGGGAACCAAGAGACCCGTTGTTGAAAGT170.11610435732823385No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAGAAGT170.11610435732823385No Hit
CGGCTGCGTTCTTCATCGATGCGGGAACCAAGAGATCCGTTGTTGAGAGT170.11610435732823385No Hit
CGGCTGCGTTCTTCATCGATGCAGGAACCAAGAGATCCGTTGTTGAAAGT150.10244502117197105No Hit
CGGCTGCGTTCTTCATCGATGCCAAAACCAAGAGATCCGTTGTTAAAAGT150.10244502117197105No Hit
AGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGT150.10244502117197105No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)