FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n02_repeat-ITSATH343.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n02_repeat-ITSATH343.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11759
Sequences flagged as poor quality0
Sequence length301
%GC47

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT828870.4821838591717No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGAAAGT122410.409048388468408No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGT1941.649800153074241No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGT1461.241602177055872No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT910.7738753295348244No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGT680.5782804660260227No Hit
CGGCTGCGTTCTTCATCGATGCAAGAGCCAAGAGATCCGTTGTTAAAAGT640.5442639680244918No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGGAAGT440.37418147801683815No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGGGATCCGTTGTTGAAAGT420.3571732290160728No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGGTCCGTTGTTGAAAGT420.3571732290160728No Hit
CGGCCGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT400.3401649800153074No Hit
CGGCTGCGTTCTTCATCGATGCCAGGGCCAAGAGATCCGTTGTTGAAAGT400.3401649800153074No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTAAAAGT380.32315673101454206No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCGAGAGATCCGTTGTTGAAAGT350.297644357513394No Hit
CGGCTGCGTTCTTCATCGATGCCAAAGCCAAGAGATCCGTTGTTGAAAGT320.2721319840122459No Hit
AGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT320.2721319840122459No Hit
CGGCTGCGTTCTTCATCGATGCGAGTTACTTCCTCTAAATGACCAAGCCC300.25512373501148056No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGTTCCGTTGTTGAAAGT290.24661961051109788No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAGGT280.2381154860107152No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGACCCGTTGTTGAAAGT270.22961136151033254No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGCTGTTGAAAGT250.21260311250956712No Hit
CGGCTGCGTTCTTCATCGATGCCGGAGCCAAGAGATCCGTTGTTGAAAGT250.21260311250956712No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTCGAAAGT240.20409898800918444No Hit
CGGCTGCGTTCTTTATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT220.18709073900841908No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGC220.18709073900841908No Hit
CGGCTGCGTTCTTCATCAATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT200.1700824900076537No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAGGAGATCCGTTGTTGAAAGT170.14457011650650567No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTCGTTGAAAGT170.14457011650650567No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCTGTTGTTGAAAGT160.13606599200612296No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCGAGAGATCCGTTGTTGAAAGT150.12756186750574028No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGTCAAGAGATCCGTTGTTGAAAGT140.1190577430053576No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAAATCCGTTGTTGAAAGT130.1105536185049749No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAGAGT120.10204949400459222No Hit
CGGCTGCGTTCTTCATTGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT120.10204949400459222No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)