FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n02_repeat-ITSATH335.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n02_repeat-ITSATH335.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13817
Sequences flagged as poor quality0
Sequence length301
%GC46

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT803758.16747484982269No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGAAAGT236117.08764565390461No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGT7825.659694579141637No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGT2982.156763407396685No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGT1531.1073315480929289No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT1090.7888832597524789No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTAAAAGT780.5645219656944345No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGGAAGT510.36911051603097633No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGGTCCGTTGTTGAAAGT400.2894984439458638No Hit
CGGCCGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT390.28226098284721723No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGGGATCCGTTGTTGAAAGT370.267786060649924No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCGAGAGATCCGTTGTTGAAAGT350.2533111384526308No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAGGT350.2533111384526308No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGTTCCGTTGTTGAAAGT350.2533111384526308No Hit
CGGCTGCGTTCTTCATCGATGCCAGGGCCAAGAGATCCGTTGTTGAAAGT310.22436129405804445No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCGAGAGATCCGTTGTTGAAAGT290.20988637186075124No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGACCCGTTGTTGAAAGT260.18817398856481146No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGCTCCGTTGTTGAAAGT260.18817398856481146No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAGGAGATCCGTTGTTGAAAGT250.18093652746616487No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTCGTTGAAAGT250.18093652746616487No Hit
CGGCTGCGTTCTTTATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT240.17369906636751828No Hit
CGGCTGCGTTCTTCATCGATGCCGGAGCCAAGAGATCCGTTGTTGAAAGT230.16646160526887166No Hit
CGGCTGCGTTCTTCATCGATGCCAAAGCCAAGAGATCCGTTGTTGAAAGT220.1592241441702251No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGC220.1592241441702251No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAGAGT210.1519866830715785No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTCGAAAGT210.1519866830715785No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGCTGTTGAAAGT200.1447492219729319No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGCTGAAAGT200.1447492219729319No Hit
CGGCTGCGTTCTTCATCGATGCGAGTTACTTCCTCTAAATGACCAAGCCC190.1375117608742853No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGGTCCGTTGTTGAAAGT160.11579937757834552No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAAATCCGTTGTTGAAAGT150.10856191647969891No Hit
CGGCTGCGTTCTTCATTGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT150.10856191647969891No Hit
AGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT140.10132445538105232No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGCTGTTGAAAGT140.10132445538105232No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)