FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n02_repeat-ITSATH322.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n02_repeat-ITSATH322.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences48
Sequences flagged as poor quality0
Sequence length301
%GC42

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCTGCGTTCTTCATCGATGCGAGTTACTTCCTCTAAATGACCAAGCCC3062.5No Hit
CGGCTGCGTTCTTCATCGATGCAAGAGCCAAGAGATCCGTTGTTAAAAGT36.25No Hit
CGGCTGCGTCCTTCATCGATGCGAGTTACTTCCTCTAAATGACCAAGCCC12.083333333333333No Hit
CGGCTGCATTCGTCATCGATGACAGAGCCAAGAGATCCCTTGTTGCAAGT12.083333333333333No Hit
CGGCTGCGTTCTTCATCGATGCGAGTTACTTCCTCTAAATGACCAAGCTC12.083333333333333No Hit
ACTCCATGAAATCCGCCCGAGACCTTGTAGGAATTCTGGTTGAACTTGCC12.083333333333333No Hit
CGGCTGCGTTCTTCATCGATGCGAGTTACTTCGTCTAAATGACCAAGCCC12.083333333333333No Hit
CGGCTGCGTTCTTCATCGATGCGAGATACTTCCTCTAAATGACCAAGCCC12.083333333333333No Hit
CGGCTGCGTTCTTCATCGATGCGAGTGACGACCTCTAAATGACCAAGCCT12.083333333333333No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT12.083333333333333No Hit
CGGCTGCGTTCTTCATCGATGCGCGAGCCAAGAGATCCGTTGTTGAAAGT12.083333333333333No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGT12.083333333333333No Hit
CGGCTGCGTTCTTCATCGATGCGAGTTACTTCCTATAAATGACCAAGCCC12.083333333333333No Hit
CGGCTGCGTTCTTCATCGATGCGAGTTACTTCCTCTAAATGACTAAGCCC12.083333333333333No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGAAAGT12.083333333333333No Hit
CGTCTGCATTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAAT12.083333333333333No Hit
CGGCTGCGTCTTCATCGATGCGAGTTACTTCCTCAAAATGACCAAGCCCT12.083333333333333No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)