FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n02_repeat-ITSATH305.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n02_repeat-ITSATH305.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11831
Sequences flagged as poor quality0
Sequence length301
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTAAAAGT358030.259487786324062No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGT249421.08021299974643No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT9457.987490491082749No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGAAAGT8577.2436818527597No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGT5584.716422956639337No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGT4663.938804834756149No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT3893.287972276223481No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGT2482.0961879807285944No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGT1020.8621418307835348No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGCTAAAAGT660.5578564787422872No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTCAAAAGT390.3296424647113515No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAACT310.2620234975910743No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGT310.2620234975910743No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCTTTGCTAAAAGT250.21130927225086635No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTCGCTAAAAGT240.20285690136083173No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCATTGTTGAAAGT230.19440453047079706No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAGGT220.1859521595807624No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGGGATCCGTTGCTAAAAGT200.1690474178006931No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCTGTTGCTAAAAGT200.1690474178006931No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGCTAAAAGT190.16059504691065843No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTAAAAGT190.16059504691065843No Hit
CGGCTGCGTTCTTCATCGATGCGAGGGCCAAGAGATCCGTTGCTAAAAGT190.16059504691065843No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGCTGCTAAAAGT180.15214267602062378No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGGTCCGTTGCTAAAAGT180.15214267602062378No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTAAAGGT180.15214267602062378No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCATTGTTGAAAGT170.14369030513058914No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGACCCGTTGCTAAAAGT170.14369030513058914No Hit
CGGCTGCGTTCTTCATCGATGCCAGGGCCAAGAGATCCATTGTTGAAAGT170.14369030513058914No Hit
CGGCTGCGTTCTTTATCGATGCGAGAGCCAAGAGATCCGTTGCTAAAAGT160.13523793424055447No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCGAGAGATCCGTTGCTAAAAGT160.13523793424055447No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGCTAAAAGT160.13523793424055447No Hit
CGGCTGCGTTCTTCATCGATGCAAGAGCCAAGAGATCCGTTGCTAAAAGT140.11833319246048515No Hit
CGGCTGCGTTCTTCATCGATGCGGGAGCCAAGAGATCCGTTGCTAAAAGT130.10988082157045052No Hit
CGGCTGCGTTCTTCATCGATGCCGGAGCCAAGAGATCCATTGTTGAAAGT130.10988082157045052No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAGGAGATCCGTTGCTAAAAGT130.10988082157045052No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGC130.10988082157045052No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCGAGAGATCCATTGTTGAAAGT120.10142845068041587No Hit
CGGCTGTGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGT120.10142845068041587No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGGGATCCATTGTTGAAAGT120.10142845068041587No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)