FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n02_repeat-ITSATH295.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n02_repeat-ITSATH295.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13
Sequences flagged as poor quality0
Sequence length301
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGT430.76923076923077No Hit
ACGCCATGTAGGCCACCCGATGCCGCGTACGAACTGCCGCCGAACTTGCC17.6923076923076925No Hit
GTACGTCATCCCCACCTTCCTCCGGCTTATCACCGGCGGTTACCTTAAAG17.6923076923076925No Hit
ACTCCATGAAAACCACCCGAGACGCCGTAGGACTTGCCGTCGAACTTGCC17.6923076923076925No Hit
GTACGTCATCCCCACCTTCCTCACAGTTTGCACTGGCAGTCTTGTTAGAG17.6923076923076925No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGT17.6923076923076925No Hit
ACGCCATGGAGTCCGCCTGACACGGCGTAGGCGCCGCCGCCGAACTTGCC17.6923076923076925No Hit
CGGTTCCTTTCTTATCCATTGCCAGAACCAAGGGATCCGTGTTTGAAATT17.6923076923076925No Hit
CGGCTGCGTTCTTCATCGATGCGGGAACCAAGAGATCCGTTGTTGAAAGT17.6923076923076925No Hit
CGGCTGCGTTCTTCATCGATGCGAGATACATGCGCTACATGATCAAGCCC17.6923076923076925No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)