FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n02_repeat-ITSATH291.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n02_repeat-ITSATH291.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences233
Sequences flagged as poor quality0
Sequence length301
%GC47

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT10344.20600858369099No Hit
CGGCTGCGTTCTTCATCGATGCGAGTTACTTCCTCTAAATGACCAAGCCC7933.90557939914164No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGGGATCCGTTGTTGAAAGT52.1459227467811157No Hit
CGGCTGCGTTCTTCATCGATGCGAGTTACTTCCTATAAATGACCAAGCCC31.2875536480686696No Hit
CGGCTGCGTTCTTCATCGATGCGAGATTACTTCCTCTAAATGACCAAGCC31.2875536480686696No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGT20.8583690987124464No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGAAAGT20.8583690987124464No Hit
CGGCTGCGTTCTTCATCGATGCGAGTTACTTCCTCTAAATGACCAAGACC20.8583690987124464No Hit
CGGCTGTGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT10.4291845493562232No Hit
CGGCGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTT10.4291845493562232No Hit
CGGCTGCGTTCTTCATCGATGCGAGTTACTTCCTCTAAATGACCAAGTCC10.4291845493562232No Hit
CGGCTGCGTTCTTCATCGATGCGAGTTACTTCCTCTAAATGACCAAGCCT10.4291845493562232No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTTAAAGT10.4291845493562232No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT10.4291845493562232No Hit
CGGCTGCGTTCTTCATCGATGCGAGTTACTTCCTCTAAATGACCACGCCC10.4291845493562232No Hit
CGTCTGCGTTCTTCATCGATGCGAGTTACTTCCTCTAAATGACCAAGCCC10.4291845493562232No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTCGTTGAAAGT10.4291845493562232No Hit
CGGCTGCGTTCTTCATCGATGCGAGTTACATCCTCTAAATGACCAAGCCC10.4291845493562232No Hit
CGGCTGCGTTCTTCATCGATGCCAGAATTAAGAGATCCGTTGTTGAAAGT10.4291845493562232No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTAAAAGT10.4291845493562232No Hit
CGGATGCGTTCTTCATCGATGCGAGTTACTTCCTCTAAATGACCAAGCCC10.4291845493562232No Hit
CGGCTGCGTTCTTCTCGATGCGAGTTACTTCCTCTAAATGACCAAGCCCT10.4291845493562232No Hit
CAGCTGCGTTCTTCATCGATGCGAGTTACTTCCTCTAAATGACCAAGCCC10.4291845493562232No Hit
CGGCTGCGTTCTTCATCGATGCGAGTTACTTCCTCTACATGACCAAGCCC10.4291845493562232No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCGAGAGATCCGTTGTTGAAAGT10.4291845493562232No Hit
CGGCTGCGTTCTTCATCGATGCGAGTTACTTCCTGTAAATGACCAAGCCC10.4291845493562232No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGACCCGTTGTTGAAAGT10.4291845493562232No Hit
CGGCTGCGTTCTTTATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT10.4291845493562232No Hit
CGGCTGGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAG10.4291845493562232No Hit
CGGCTGCGTTCTTCGTCGATGCGAGTTCCTTCATCTAAATGACCAAGCCC10.4291845493562232No Hit
CGGCTGCGTTCTTCATCGATGCGAGGTTACTTCCTTCTAAATGACCAAGC10.4291845493562232No Hit
CGGCTGCGTTCTTCATCGATGCGAGTTACTTCCTTTAAATGACCAAGCCC10.4291845493562232No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGGTCCGTTGTTGAAAGT10.4291845493562232No Hit
CGGCTGCGTTCTTCATCGATGCGAAAACCAAGAGATCCGTTGTTGAAAGT10.4291845493562232No Hit
CGGCTGCGTTCTTCATCGATGCGAGTTACTTCCTCCTAAATGACCAAGCC10.4291845493562232No Hit
CGGACGCGTTCTTAATCGATGGAGGAGCAAAGAGATACGTAATTAAAAGT10.4291845493562232No Hit
ACCCCATGGAGTCCGCCGGAAACAGCATAGTTGGAGGAGTCGAATTTACC10.4291845493562232No Hit
GCGGCTGCGTTCTTCATCGATGCGAGTTACTTCCTCTAAATGACCAAGCC10.4291845493562232No Hit
CGGCTGCGTTCTTTATCGATGCGAGTTACTTCCTCTAAATGACCAAGCCC10.4291845493562232No Hit
GTACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCATTAGAG10.4291845493562232No Hit
CGGCTGCGTTCTTCGTCGATGCGAGTTACTTCCTCTAAATGACCAAGCCC10.4291845493562232No Hit
CGGCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGT10.4291845493562232No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)