FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n02_repeat-ITS-OODve895.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n02_repeat-ITS-OODve895.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2064
Sequences flagged as poor quality0
Sequence length301
%GC47

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT50724.563953488372093No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT48023.25581395348837No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT33316.13372093023256No Hit
AGCCTAGACATCCACTGCTGTCGTGGTAATGATCCTTCCGCTGTCTCTTA1517.315891472868217No Hit
AGCCTAGACATCCACTGCTGCTCGTGGTAATGATCCTTCCGCTGTCTCTT1346.492248062015504No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAGAGCAAGGACTTT291.4050387596899225No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGAGCCTTCCGCTGTCTCT70.3391472868217054No Hit
AGCCTAGACATCCACTGCTGGTGGTAATGATCCTTCCGCTGTCTCTTATA60.29069767441860467No Hit
AGCCTAGACATCCACTGCTGTCCCGTGGTAATGATCCTTCCGCTGTCTCT60.29069767441860467No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGAATTT50.24224806201550386No Hit
AGCCTAGACATCCACTGCTGAAGGTTGTTGTAAATAAAAGCAAGGACTTT50.24224806201550386No Hit
AGCCTAGACATCCACTGCTGAGAGTTGTTATCTAGTAAGAGCAAGGACTT50.24224806201550386No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAAGAAAAGCAAGGACTTT50.24224806201550386No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGAACCTTCCGCTGTCTCT50.24224806201550386No Hit
AGCCTAGACATCCACTGCTAAAAGTTGTTGTAAATAAAAGCAAGGACTTT50.24224806201550386No Hit
AGCCTAGACATCCACTGCTGTCTTGTGGTAATGATCCTTCCGCTGTCTCT40.1937984496124031No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTGTAAATAAAAGCAAGGACTTT40.1937984496124031No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTTCGCTGTCTCT30.14534883720930233No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCC30.14534883720930233No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGCAAATAAAAGCAAGGACTTT30.14534883720930233No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAACAAGGACTT30.14534883720930233No Hit
AGCCTAGACATCCACTGCTGCTCGTGGTAATGATTCTTCCGCTGTCTCTT30.14534883720930233No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAGGCAAGGACTTT30.14534883720930233No Hit
AGCCTAGACATCCACTCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTTC30.14534883720930233No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGAATT30.14534883720930233No Hit
AGCCTAGACATCCACTGCTGAAAGTCGTTATCTAGTAAGAGCAAGGACTT30.14534883720930233No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAGTAAAAGCAAGGACTTT30.14534883720930233No Hit
AGCCTAGACATCCATTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT30.14534883720930233No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGGGCAAGGACTT30.14534883720930233No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACCT30.14534883720930233No Hit
AGCCTAGACATCCACTGCTGCTCGTGGTAATGATGCTTCCGCTGTCTCTT30.14534883720930233No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)