FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n02_repeat-ITS-OODve846.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n02_repeat-ITS-OODve846.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2882
Sequences flagged as poor quality0
Sequence length301
%GC42

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT54418.875780707841777No Hit
AGCCTAGACATCCACTGCTGCCGACGAGTGGTAATGATCCTTCCGCTGTC46416.0999306037474No Hit
AGCCTAGACATCCACTGCTGTCGTGGTAATGATCCTTCCGCTGTCTCTTA1966.800832755031229No Hit
AGCCTAGACATCCACTGCTGGTCCGTGGGCTGGAGATGTGGTAATGATCC1946.731436502428869No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGTAATGATCCTTCCGCTGTCTC1434.961832061068702No Hit
AGCCTAGACATCCACTGCTGTTGTGGTAATGATCCTTCCGCTGTCTCTTA1264.371963913948647No Hit
AGCCTAGACATCCACTGCTGTGGTAATGATCCTTCCGCTGTCTCTTATAC1204.163775156141568No Hit
AGCCTAGACATCCACTGCTGTCTGTGGTAATGATCCTTCCGCTGTCTCTT1073.7126995142262316No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTT983.4004163775156147No Hit
AGCCTAGACATCCACTGCTGGATGTGGTAATGATCCTTCCGCTGTCTCTT582.012491325468425No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAGAGACT431.4920194309507286No Hit
AGCCTAGACATCCACTGCTGCAGCGTCAGATGTGGTAATGATCCTTCCGC260.9021512838306732No Hit
AGCCTAGACATCCACTGCTGTCTCTTATACACATCTGACGCTGCCGACGA250.8674531575294934No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC240.8327550312283136No Hit
AGCCTAGACATCCACTGCTGCCGACGATGTGGTAATGATCCTTCCGCTGT230.7980569049271339No Hit
AGCCTAGACATCCACTGCTGGTCCGCGGGCTGGAGATGTGGTAATGATCC210.7286606523247745No Hit
AGCCTAGACATCCACTGCTGGTAATGATCCTTCCGCTGTCTCTTATACAC210.7286606523247745No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGGCTCGGAGATGTGGTAATGATC140.4857737682165163No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT120.4163775156141568No Hit
AGCCTAGACATCCACTGCTGTGTCTCGTGGTAATGATCCTTCCGCTGTCT90.31228313671061764No Hit
AGCCTAGACATCCACTGCTGTGGTAATGATCCTTACGCTGTCTCTTATAC80.2775850104094379No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGAGCCTTCCGCTGTCTCT80.2775850104094379No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGAACCTTCCGCTGTCTCT70.24288688410825815No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT60.2081887578070784No Hit
AGCCTAGACATCCACTGCTGTTGTGGTAATGATCATTCCGCTGTCTCTTA60.2081887578070784No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGCGCTAGATGTGTATAAGAGACA50.17349063150589866No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTACTGATCCTTCCGCTGTCTCT50.17349063150589866No Hit
AGCCTAGACATCCACTGCTGTTGTGGTAATGATCTTTCCGCTGTCTCTTA50.17349063150589866No Hit
AGCCTAGACATCCACTGCTGTCGTGGTAATGATCGTTCCGCTGTCTCTTA50.17349063150589866No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATAATCCTTCCGCTGTCTCT50.17349063150589866No Hit
AGCCTAGACATCCACTGCTGGTCCGTGGGCTGGACATGTGGTAATGATCC40.13879250520471895No Hit
AGCCTAGACATCCACTGCTGTCCCGTGGTAATGATCCTTCCGCTGTCTCT40.13879250520471895No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGGCTCGGAGGTGGTAATGATCCT40.13879250520471895No Hit
AGCCTAGACATCCACTGCTGCCGACGAGTGGTAAAGATCCTTCCGCTGTC40.13879250520471895No Hit
AGCCTAGACATCCACTGCTGCCGACGACGTGGTAATGATCCTTCCGCTGT40.13879250520471895No Hit
AGCCTAGACATCCACTGCTGCGTGCGCAGTGGTAATGATCCTTCCGCTGT40.13879250520471895No Hit
AGCCTAGACATCCACTGCTGTCTCGCGGGCTCGGAGATGTGGTAATGATC30.1040943789035392No Hit
AGCCTAGACATCCACTGCTGGCGACGAGTGGTAATGATCCTTCCGCTGTC30.1040943789035392No Hit
AGCCTAGACATCCACTGCTGGACGTGGTAATGATCCTTCCGCTGTCTCTT30.1040943789035392No Hit
AGCCTAGACATCCACTGCTGGTCCGTGGGCTGGAGATGTGGTAATAATCC30.1040943789035392No Hit
AGCCTAGACATCCACTGCTTCCGACGAGTGGTAATGATCCTTCCGCTGTC30.1040943789035392No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCTAAAACTTT30.1040943789035392No Hit
AGCCTAGACATCCACTGCTGTCGTGGTAATGATCATTCCGCTGTCTCTTA30.1040943789035392No Hit
AGCCTAGACATCCACTGCTGGTCCGTGGGTTGGAGATGTGGTAATGATCC30.1040943789035392No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGAGAC30.1040943789035392No Hit
AGCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCTT30.1040943789035392No Hit
AGACTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT30.1040943789035392No Hit
AGCCTAGACATCCACTGCTGACTCGTGGTAATGATCCTTCCGCTGTCTCT30.1040943789035392No Hit
AGCCTAGACATCCACTGCTGGTCCGTGGGCTGGATATGTGGTAATGATCC30.1040943789035392No Hit
AGCCTAGACATCCACTGCTGTGGTAATGATCCTTGCGCTGTCTCTTATAC30.1040943789035392No Hit
AGACTAGACATCCACTGCTGCCGACGAGTGGTAATGATCCTTCCGCTGTC30.1040943789035392No Hit
AGCCTAGACATCCACTGCTGCCTCGTGGTAATGATCCTTCCGCTGTCTCT30.1040943789035392No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)