FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n02_repeat-ITS-OODve836.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n02_repeat-ITS-OODve836.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2732
Sequences flagged as poor quality0
Sequence length301
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGCCGACGAGTGGTAATGATCCTTCCGCTGTC49117.972181551976576No Hit
AGCCTAGACATCCACTGCTGTGTGGTAATGATCCTTCCGCTGTCTCTTAT2418.821376281112737No Hit
AGCCTAGACATCCACTGCTGTCTGTGGTAATGATCCTTCCGCTGTCTCTT2278.308931185944363No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC1866.808199121522694No Hit
AGCCTAGACATCCACTGCTGACGGTGGTAATGATCCTTCCGCTGTCTCTT1796.551976573938506No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT1615.89311859443631No Hit
AGCCTAGACATCCACTGCTGGTGGTAATGATCCTTCCGCTGTCTCTTATA1314.79502196193265No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGGCTCGGAGATGTGGTAATGAT752.745241581259151No Hit
AGCCTAGACATCCACTGCTGCTCGTGGTAATGATCCTTCCGCTGTCTCTT682.4890190336749636No Hit
AGCCTAGACATCCACTGCTGCCGACGGTGGTAATGATCCTTCCGCTGTCT531.9399707174231333No Hit
AGCCTAGACATCCACTGCTGCCGACAAGTGGTAATGATCCTTCCGCTGTC220.8052708638360175No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGTAATGATCCTTCCGCTGTCTC190.6954612005856515No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGGCTCGGAGGTGTGGTAATGAT100.36603221083455345No Hit
AGCCTAGACATCCACTGCTGTCTCTTATACACATCTGACGCTGCCGACGA70.2562225475841874No Hit
AGCCTAGACATCCACTGCTGTGTGGTAATGATCCATCCGCTGTCTCTTAT60.21961932650073207No Hit
AGCCTAGACATCCACTGCTGCGTGGTAATGATCCTTCCGCTGTCTCTTAT60.21961932650073207No Hit
AGCCTAGACATCCACTGCTGTCTGTGGTAATGATTCTTCCGCTGTCTCTT50.18301610541727673No Hit
AGCCTAGACATCCACTGCTGTCCCGTGGTAATGATCCTTCCGCTGTCTCT40.14641288433382138No Hit
AGCCTAGACATCCACTGCTGACGGTGGTAATGATGCTTCCGCTGTCTCTT40.14641288433382138No Hit
AGCCTAGACATCCACTGCTGGTCTCGTTGGCTCGGAGATGTGGTAATGAT40.14641288433382138No Hit
AGCCTAGACATCCACTGCTGTCGACGAGTGGTAATGATCCTTCCGCTGTC40.14641288433382138No Hit
AGCCTAGACATCCACTGCTGACGGTGGTAATGATACTTCCGCTGTCTCTT40.14641288433382138No Hit
AGCCTAGACATCCACTGCTGCCGACGGGTGGTAATGATCCTTCCGCTGTC40.14641288433382138No Hit
AGCCTAGACATCCACTGCTGACTGTGGTAATGATCCTTCCGCTGTCTCTT40.14641288433382138No Hit
AGCCTAGACATCCACTGCTGTCTGTGGTAATTATCCTTCCGCTGTCTCTT30.10980966325036604No Hit
AGCCTAGACATCCACTGCTGTGGTAATGATCCTTCCGCTGTCTCTTATAC30.10980966325036604No Hit
AGCCTAGACATCCACTGCTGCCGATGAGTGGTAATGATCCTTCCGCTGTC30.10980966325036604No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGGGTCGGAGATGTGGTAATGAT30.10980966325036604No Hit
AGCCTAGACATCCACTGCTGACGGTGGTAATGATTCTTCCGCTGTCTCTT30.10980966325036604No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGGCTCGGAGTGGTAATGATCCTT30.10980966325036604No Hit
AGCCTAGACATCCACTGCTGAGTGGTAATGATCCTTCCGCTGTCTCTTAT30.10980966325036604No Hit
CGCCTAGACATCCACTGCTGCCGACGAGTGGTAATGATCCTTCCGCTGTC30.10980966325036604No Hit
AGCCTAGACATCCACTGCTGTGTGGTAATGATCCGTCCGCTGTCTCTTAT30.10980966325036604No Hit
AGCCTAGACATCCACTGCTGTGTGGTAATGCTCCTTCCGCTGTCTCTTAT30.10980966325036604No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT30.10980966325036604No Hit
AGCCTAGACATCCACTGCTGCCTCGTGGTAATGATCCTTCCGCTGTCTCT30.10980966325036604No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)