FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n02_repeat-ITS-OODve800.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n02_repeat-ITS-OODve800.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9516
Sequences flagged as poor quality0
Sequence length301
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT557458.575031525851195No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATTTAATTAAAAGCAAGAATT128613.51408154686843No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT5746.0319461958806215No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT1011.0613703236654055No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAAGACTT930.9773013871374527No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT860.903741067675494No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACTAAAGACTT490.5149222362337116No Hit
AGCCTAGACATCCACTGCTAAAAGTTGTTATCTAGTAAAAGCAAGGACTT390.4098360655737705No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTC330.3467843631778058No Hit
AGCCTAGACATCCACTGCTGGAAGTTGTTATCTAGTAAAAGCAAGGACTT320.33627574611181166No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTACCTAGTAAAAGCAAGGACTT320.33627574611181166No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAGGCAAGGACTT310.3257671290458176No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAGAAGCAAGGACTT300.31525851197982346No Hit
AGCCTAGACATCCACTGCTGAAGGTTGTTATCTAGTAAAAGCAAGGACTT280.2942412778478352No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAAGCAAGGACTT260.273224043715847No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCCAGTAAAAGCAAGGACTT240.25220680958385877No Hit
AGCCTAGACATCCACTGCTGTGGTAATGATCCTTCCGCTGTCTCTTATAC240.25220680958385877No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACCT230.24169819251786467No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC230.24169819251786467No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAGGGACTT230.24169819251786467No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTATTAAAAGCAAGGACTT230.24169819251786467No Hit
AGCCTAGACATCCACTGCTGAAAGTCGTTATCTAGTAAAAGCAAGGACTT210.22068095838587645No Hit
AGCCTAGACATCCACTGCTGAGAGTTGTTATCTAGTAAAAGCAAGGACTT210.22068095838587645No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGAACTT210.22068095838587645No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAATAAAAGCAAGGACTT200.2101723413198823No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTGGTAAAAGCAAGGACTT200.2101723413198823No Hit
AGCCTAGACATCCACTGCTGAAAGCTGTTATCTAGTAAAAGCAAGGACTT190.1996637242538882No Hit
AGCCTAGACATCCACTGCTGAAAGTTATTATCTAGTAAAAGCAAGGACTT170.17864649012189995No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTACTAAAAGCAAGGACTT160.16813787305590583No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCGAGGACTT160.16813787305590583No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGACTT150.15762925598991173No Hit
CGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT140.1471206389239176No Hit
AGCCTATACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT130.1366120218579235No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTCTAGTAAAAGCAAGGACTT130.1366120218579235No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGCAAAAGCAAGGACTT110.11559478772593526No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGGCTT110.11559478772593526No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAACAAGGACTT110.11559478772593526No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTTAGTAAAAGCAAGGACTT100.10508617065994115No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATTTAATTAAAGGCAAGAATT100.10508617065994115No Hit
AGCCTAGACATCCACTGCTAAAAGTTGCTATTTAATTAAAAGCAAGAATT100.10508617065994115No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCGAGTAAAAGCAAGGACTT100.10508617065994115No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTGAAAGCAAGGACTT100.10508617065994115No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATTTACTTAAAAGCAAGAATT100.10508617065994115No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTCATCTAGTAAAAGCAAGGACTT100.10508617065994115No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)