FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n02_repeat-ITS-OODve780.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n02_repeat-ITS-OODve780.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences130
Sequences flagged as poor quality0
Sequence length301
%GC42

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC10177.6923076923077No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT21.5384615384615385No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT21.5384615384615385No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTT10.7692307692307693No Hit
AGCATAGACATCCACTGCTGAAAGTTGCTATTTAATTAAAAGCAAGAATT10.7692307692307693No Hit
AGCCTAGAATCCACTGCTGAAATAGGTGTGGTAATGATCCTTCCGCTGTC10.7692307692307693No Hit
AGCCTAGACATCCACTGCTAAAAGTTGTCATTGATTAAAACCAAAGACTC10.7692307692307693No Hit
CGCGTAATATATAGTTACCTGGCCTTTTAAATTATATGTTTATCTAAAAA10.7692307692307693No Hit
ACCCCATGGAGACCGCCCGAGACCTTGTAGCCCCCGCCGCCGAACTTCCC10.7692307692307693No Hit
AGCCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGA10.7692307692307693No Hit
AGCCTAGACATCCACTGCTGACGAGTGGTAATGATCCTTCCGCTGTCTCT10.7692307692307693No Hit
AGCCTAGACATCCACTGCTAAAAGTTGTTATCTAGAATAAAAGCAGAGAC10.7692307692307693No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTGGAATAAAAGCAGAGAC10.7692307692307693No Hit
CGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC10.7692307692307693No Hit
AGCCTAGACATCCCCTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC10.7692307692307693No Hit
AGCCTAGACATCCACTGCTGAAAGGTGTTATCTAGGATAAAAGCAGAGAC10.7692307692307693No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTTAAAAGCAAAACT10.7692307692307693No Hit
AGCCTGGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC10.7692307692307693No Hit
AGCCTAGACATCCACTGCTGAAAGCTGTTATCTAGAATAAAAGCAGAGAC10.7692307692307693No Hit
AGCCTAGACATCCACTGCTGAAAGTTGATATCTAGAATAAAAGCAGAGAC10.7692307692307693No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAATCAGAGAC10.7692307692307693No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTATAATAAAAGCAGAGAC10.7692307692307693No Hit
AGCCTAGACATCCACTGCTAAAAGTTTGTGGAAGTGAACGCAAAAACTTT10.7692307692307693No Hit
ACTCCATGAAAGCCTCCTGAGACGGCATACCCTCCGCCGCCGAACTTGCC10.7692307692307693No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT10.7692307692307693No Hit
AGCCTAGACATCCACTGCTAAAAGTTGTCATTGATTAAAACCAAAGACTT10.7692307692307693No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTACCTAGTAAGAGCAAGGACTT10.7692307692307693No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT10.7692307692307693No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)