FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n02_repeat-ITS-OODve779.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n02_repeat-ITS-OODve779.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2539
Sequences flagged as poor quality0
Sequence length301
%GC42

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGCCGACGAGTGGTAATGATCCTTCCGCTGTC57022.449783379283183No Hit
AGCCTAGACATCCACTGCTGAGTGGTAATGATCCTTCCGCTGTCTCTTAT32512.800315084679006No Hit
AGCCTAGACATCCACTGCTGATGTGGTAATGATCCTTCCGCTGTCTCTTA26810.555336746750688No Hit
AGCCTAGACATCCACTGCTGCCGACGTGGTAATGATCCTTCCGCTGTCTC1495.868452146514376No Hit
AGCCTAGACATCCACTGCTGGATGTGGTAATGATCCTTCCGCTGTCTCTT1365.356439543127216No Hit
AGCCTAGACATCCACTGCTGAGATGTGGTAATGATCCTTCCGCTGTCTCT1184.647499015360379No Hit
AGCCTAGACATCCACTGCTGCGGTGGTAATGATCCTTCCGCTGTCTCTTA1154.529342260732571No Hit
AGCCTAGACATCCACTGCTGTGGTAATGATCCTTCCGCTGTCTCTTATAC873.4265458842063805No Hit
AGCCTAGACATCCACTGCTGGGCTCGGAGATGTGGTAATGATCCTTCCGC692.717605356439543No Hit
AGCCTAGACATCCACTGCTGTCAGATGTGGTAATGATCCTTCCGCTGTCT461.811736904293029No Hit
AGCCTAGACATCCACTGCTGTCTCTTATACACATCTGACGCTGCCGACGA371.45726664040961No Hit
AGCCTAGACATCCACTGCTGGGGCTCGGAGATGTGGTAATGATCCTTCCG351.3784954706577393No Hit
AGCCTAGACATCCACTGCTGATGTGGTAATGATCATTCCGCTGTCTCTTA70.27569909413154786No Hit
AGCCTAGACATCCACTGCTGCCGACGAGTGGTAATAATCCTTCCGCTGTC60.23631350925561243No Hit
AGCCTAGACATCCACTGCTGAGTGGTAATGATCCATCCGCTGTCTCTTAT60.23631350925561243No Hit
AGCCTAGACATCCACTGCTGAGTGGTAATGATCCGTCCGCTGTCTCTTAT60.23631350925561243No Hit
AGCCTAGACATCCACTGCTTAGTGGTAATGATCCTTCCGCTGTCTCTTAT50.19692792437967704No Hit
AGCCTAGACATCCACTGCTGCCGACGAGTGGTAAAGATCCTTCCGCTGTC50.19692792437967704No Hit
AGCCTAGACATCCACTGCTGGATGTGGTAATGATACTTCCGCTGTCTCTT50.19692792437967704No Hit
AGCCTAGACATCCACTGCTGCCGACGAGTGGTAACGATCCTTCCGCTGTC50.19692792437967704No Hit
AGCCTAGACATCCACTGCTGCCGACGAGTGGTAAGGATCCTTCCGCTGTC40.15754233950374164No Hit
AGCCTAGACATCCACTGCTGCCGACGAGTGGTAATGATCCTTCCGCTGTT40.15754233950374164No Hit
AGCCTAGACATCCACTGCTGATGTGGTAATGAACCTTCCGCTGTCTCTTA30.11815675462780621No Hit
AGCCTAGACATCCACTGCTACCGACGAGTGGTAATGATCCTTCCGCTGTC30.11815675462780621No Hit
CGCCTAGACATCCACTGCTGCCGACGAGTGGTAATGATCCTTCCGCTGTC30.11815675462780621No Hit
AGACTAGACATCCACTGCTGATGTGGTAATGATCCTTCCGCTGTCTCTTA30.11815675462780621No Hit
AGCCTAGACATCCACTGCTGCCGACGTGGTAATGATCCTTCCGCTGTCCC30.11815675462780621No Hit
AGCCTAGACATCCACTGCTGAGTGGTAATGATCCTTCCGCTGTCGCTTAT30.11815675462780621No Hit
AGCCTAGACATCCACTGCTGAGATGTGGTACTGATCCTTCCGCTGTCTCT30.11815675462780621No Hit
AGCCTAGACATCCACTGCTGAGTGGTAATGATCCCTCCGCTGTCTCTTAT30.11815675462780621No Hit
AGCCTAGACATCCACTGCTGTCGACGAGTGGTAATGATCCTTCCGCTGTC30.11815675462780621No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC30.11815675462780621No Hit
AGCCTAGACATCCACTGCTGCGTGGTAATGATCCTTCCGCTGTCTCTTAT30.11815675462780621No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT30.11815675462780621No Hit
AGCCTAGACATCCACTGCTGCCGAGGAGTGGTAATGATCCTTCCGCTGTC30.11815675462780621No Hit
AGCCTAGACATCCACTGCTGCCGACGTGGTAATAATCCTTCCGCTGTCTC30.11815675462780621No Hit
AGCCTAGACATCCACTGCTGCCGCCGAGTGGTAATGATCCTTCCGCTGTC30.11815675462780621No Hit
AGCCTAGACATCCACTGCTGTCTCTTATGCACATCTGACGCTGCCGACGA30.11815675462780621No Hit
AGCCTAGACATCCACTGCTGATGTGGTAATGATCTTTCCGCTGTCTCTTA30.11815675462780621No Hit
AGCCTAGACATCCACTGCTGCAGACGAGTGGTAATGATCCTTCCGCTGTC30.11815675462780621No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)