FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n02_repeat-ITS-OODve768.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n02_repeat-ITS-OODve768.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7077
Sequences flagged as poor quality0
Sequence length301
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT222231.397484809947716No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT132518.722622580189345No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT121717.196552211389008No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC4276.033630069238378No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTGGATTAAAACCAAGACTTT4205.934718100890208No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT690.9749894022891056No Hit
AGCCTAGACATCCACTGCTGACGCTGCCGACGAGTGGTAATGATCCTTCC580.8195563091705524No Hit
AGCCTAGACATCCACTGCTGTCTCTGGGTGGGTGGTAATGATCCTTCCGC520.7347746220149781No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGTAATGATCCTTCCGCTGTCTC480.6782534972445952No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTCAAAGCGAGAACT330.4662992793556591No Hit
AGCCTAGACATCCACTGCTGGAAGTTGTTATCTAGTAAGAGCAAGGACTT160.22608449908153172No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACCT160.22608449908153172No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTATCTAGTTAAAAATAAAAACTT140.19782393669634024No Hit
AGCCTAGACATCCACTGCTAAAAGTTGTTATCTAGTAAGAGCAAGGACTT130.18369365550374453No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACT130.18369365550374453No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAATAAGAGCAAGGACTT110.15543309311855305No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTATTAAGAGCAAGGACTT100.14130281192595734No Hit
AGCCTAGACATCCACTGCTGAAGGTTGTTATCTAGTAAGAGCAAGGACTT100.14130281192595734No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTC100.14130281192595734No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTACCTAGTAAGAGCAAGGACTT100.14130281192595734No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGGGCAAGGACTT100.14130281192595734No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGAACTT90.1271725307333616No Hit
AGCCTAGACATCCACTGCTGTCTCTTATACACATCTGACGCTGCCGACGA90.1271725307333616No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTATTAAAAGCAAGGACTT90.1271725307333616No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGGCTT90.1271725307333616No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAAGAAGT80.11304224954076586No Hit
AGCCTAGACATCCACTGCTGAAAGCTGTTATCTAGTAAGAGCAAGGACTT80.11304224954076586No Hit
CGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT80.11304224954076586No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTGGAGTAAAACCAAGACTTT80.11304224954076586No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)