FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n02_repeat-ITS-OODve767.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n02_repeat-ITS-OODve767.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12581
Sequences flagged as poor quality0
Sequence length301
%GC42

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAAGCAAGGACTT739458.77116286463715No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGACTT233618.56768142437008No Hit
AGCCTAGACATCCACTGCTGCCGACGAGTGGTAATGATCCTTCCGCTGTC2121.6850806772116682No Hit
AGCCTAGACATCCACTGCTGATGTGGTAATGATCCTTCCGCTGTCTCTTA1851.4704713456799936No Hit
AGCCTAGACATCCACTGCTGGTGGTAATGATCCTTCCGCTGTCTCTTATA1651.3115014704713457No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAAGCAAAGACTT1611.2797074954296161No Hit
AGCCTAGACATCCACTGCTGAAAGTTGATATCTAGTAAAAGCAAGGACTT1561.239965026627454No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGAATT1511.200222557825292No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAAGCAGGGACTT460.3656307129798903No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTGTCTAGTAAAAGCAAGGACTT400.3179397504172959No Hit
AGCCTAGACATCCACTGCTAAAAGTTGCTATCTAGTAAAAGCAAGGACTT350.27819728161513396No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTATTAAAAGCAAGGACTT340.2702487878547015No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAGGCAAGGACTT290.23050631905253954No Hit
AGCCTAGACATCCACTGCTGGAAGTTGCTATCTAGTAAAAGCAAGGACTT280.22255782529210713No Hit
CGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAAGCAAGGACTT250.19871234401080995No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAATAAAAGCAAGGACTT250.19871234401080995No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAAGCAAGGACCT240.19076385025037754No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTACCTAGTAAAAGCAAGGACTT230.18281535648994515No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAAGCAAGGGCTT230.18281535648994515No Hit
AGCCTAGACATCCACTGCTGAAGGTTGCTATCTAGTAAAAGCAAGGACTT220.17486686272951277No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGAATAAAACCAAAGACTT180.14307288768778317No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGAGTAAAACCAAAGACTT180.14307288768778317No Hit
AGCCTAGACATCTACTGCTGAAAGTTGCTATCTAGTAAAAGCAAGGACTT170.13512439392735076No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCGAGTAAAAGCAAGGACTT170.13512439392735076No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT160.12717590016691835No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAAACAAGGACTT160.12717590016691835No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAGAGCAAGGACTT150.11922740640648596No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAAGCAAGGAATT150.11922740640648596No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAGAAGCAAGGACTT150.11922740640648596No Hit
AGCCTAGACATCCACTGCTGAAAGCTGCTATCTAGTAAAAGCAAGGACTT150.11922740640648596No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCCAGTAAAAGCAAGGACTT140.11127891264605357No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCCATCTAGTAAAAGCAAGGACTT130.10333041888562118No Hit
AGTCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAAGCAAGGACTT130.10333041888562118No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAGCCAAAGACTT130.10333041888562118No Hit
AGCCTAGACATCCCCTGCTGAAAGTTGCTATCTAGTAAAAGCAAGGACTT130.10333041888562118No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAAGCAAGGACTC130.10333041888562118No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)