FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n02_repeat-ITS-OOChi759.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n02_repeat-ITS-OOChi759.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2283
Sequences flagged as poor quality0
Sequence length301
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT79634.866403854577314No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT64528.252299605781868No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC1034.511607533946561No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTTAAAGCAAGAACT522.2777047744196235No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT200.8760402978537012No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGACTT160.700832238282961No Hit
CGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT150.657030223390276No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGCGAACGCAAAAACTTT150.657030223390276No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT120.5256241787122208No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTCAATAAAAGCAAGGACTTT100.4380201489268506No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGCCTTT100.4380201489268506No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGAGAACGCAAAAACTTT90.39421813403416556No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGAATTT80.3504161191414805No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAGCGCAAAAACTTT80.3504161191414805No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGGACGCAAAAACTTT70.3066141042487955No Hit
AGCCTAGACATCCACTGCTGACAGTTGTTGTAAATAAAAGCAAGGACTTT70.3066141042487955No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATACAAGCAAGGACTTT70.3066141042487955No Hit
AGCCTAGACATCCACTGCTGGGGTGGTAATGATCCTTCCGCTGTCTCTTA70.3066141042487955No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAGATAAAAGCAAGGACTTT60.2628120893561104No Hit
AGCCTAGACATCCACTGCTGGAAGTTGTTGTAAATAAAAGCAAGGACTTT60.2628120893561104No Hit
AGCCTAGACATCCACTGCTGAAAGTTCGTGGAAGTGAACGCAAAAACTTT60.2628120893561104No Hit
AGCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTTC50.2190100744634253No Hit
AGCCTAGACATCCACTGCCGAAAGTTGTTGTAAATAAAAGCAAGGACTTT50.2190100744634253No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACCTT50.2190100744634253No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAAGAAAAGCAAGGACTTT50.2190100744634253No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTCGTAAATAAAAGCAAGGACTTT50.2190100744634253No Hit
AGCCTAGACATCCACTGCTGACAGTTTGTGGAAGTGAACGCAAAAACTTT50.2190100744634253No Hit
CGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT40.17520805957074026No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAGAAACTTT40.17520805957074026No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGGAGTGAACGCAAAAACTTT40.17520805957074026No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAGTAAAAGCAAGGACTTT40.17520805957074026No Hit
AGCCTAGACATACACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT40.17520805957074026No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGGGAACGCAAAAACTTT40.17520805957074026No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCGAAAACTTT40.17520805957074026No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAAAATAAAAGCAGAGAC30.1314060446780552No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAGGTGAACGCAAAAACTTT30.1314060446780552No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAGGGACTTT30.1314060446780552No Hit
AGCCTAGACATCCACTGCTGAAAGTTGGTGTAAATAAAAGCAAGGACTTT30.1314060446780552No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTC30.1314060446780552No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAACACTTT30.1314060446780552No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAGCTTT30.1314060446780552No Hit
AGCCTAGACATCCACTGCTAAAAGTTTGTGGAAGTGAACGCAAAAACTTT30.1314060446780552No Hit
AGCCTAGACATCCACTGCTGAGAGTTGTTGTAAATAAAAGCAAGGACTTT30.1314060446780552No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTACATAAAAGCAAGGACTTT30.1314060446780552No Hit
AGCCTAGACATCCACTGCTGAAGGTTGTTGTAAATAAAAGCAAGGACTTT30.1314060446780552No Hit
AGCCTAGACATCCACTGCTGAAAGTTGGTGGAAGTGAACGCAAAAACTTT30.1314060446780552No Hit
AGCCTAGACATCCCCTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT30.1314060446780552No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAAAAAAAGCAAGGACTTT30.1314060446780552No Hit
AGCCTAGCCATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT30.1314060446780552No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAATGAACGCAAAAACTTT30.1314060446780552No Hit
AGCCTAGACATCCACTGCTAAAAGTTGTTGTAAATAAAAGCAAGGACTTT30.1314060446780552No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTGTAAATAAAAGCAAGGACTTT30.1314060446780552No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)