FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n02_repeat-ITS-OOChi753.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n02_repeat-ITS-OOChi753.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences305
Sequences flagged as poor quality0
Sequence length301
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT5518.0327868852459No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGAGAC5016.39344262295082No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT4715.40983606557377No Hit
AGCCTAGACATCCACTGCTGCCGACGACGTGGTAATGATCCTTCCGCTGT309.836065573770492No Hit
AGCCTAGACATCCACTGCTGTAGCAATAAGTGGTAATGATCCTTCCGCTG289.180327868852459No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATGGATTAAAACCAAAAACTT61.9672131147540985No Hit
AGCCTAGACATCCACTGCTGTGGCAATAAGTGGTAATGATCCTTCCGCTG30.9836065573770493No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGT30.9836065573770493No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC20.6557377049180327No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTATCTAGAATAAAAGTAGAGACT20.6557377049180327No Hit
AGCCTAGACATCCACTGCTGAAGGTTGTATCTAGAATAAAAGTAGAGACT20.6557377049180327No Hit
AGCATAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT20.6557377049180327No Hit
AGCCTAGACATCCACTGCTGAGAGTTGTTATCTAGAATAAAAGTAGAGAC20.6557377049180327No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGATTAAAAGTAGAGAC20.6557377049180327No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTT10.32786885245901637No Hit
ACCCCGTAAAATCCGCCGGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC10.32786885245901637No Hit
AGCCCATACCTACACCGGCGGAAGATTTTTTTTAATTAAAAAAAAAAGAT10.32786885245901637No Hit
AAGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTT10.32786885245901637No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTTAGAATAAAAGCAGAGAC10.32786885245901637No Hit
ACGCCGTGAAAGCCTCCAGACACCTTGTAGCCGCCGCCGCCGAACTTGCC10.32786885245901637No Hit
AGCCTAGACATCCACTGCTGCCGACGATGTGGTAATGATCCTTCCGCTGT10.32786885245901637No Hit
AGCCTAGACATCCACTGCTGCCGACGACGTGGAATGATCCTTCCGCTGTC10.32786885245901637No Hit
AGCCTAGACATCCACTGCTGCCGACGACGTGGTATGATCCTTCCGCTGTC10.32786885245901637No Hit
AGCCTAGACATCCACTGCTGGAAGTTTGTGGAAGCAAACGCAAAAACTTT10.32786885245901637No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACC10.32786885245901637No Hit
AGCCTAGACATCCACTGCTGTCTCGTGTTAATGATCCTTCCGATGTCTCT10.32786885245901637No Hit
AGCCTAGACATCCACTGCTGTAGCAATCAGTGGTAATGATCCTTCCGCTG10.32786885245901637No Hit
AGCCTAGACATTCACTGCTGTAGCAATAAGTGGTAATGATCCTTCCGCTG10.32786885245901637No Hit
AGCCTAGACATCCACTGCTGTAGCTATTAGTGGTAATGATACTTCCGCTC10.32786885245901637No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATGTATTATAACCAAAAACTT10.32786885245901637No Hit
ACTCCGTGAAGTCCACCAGACACCTTGTACGCATTGTCGTCATTGGTGTT10.32786885245901637No Hit
ACCCCGTGTAGTCCGCCGGACACGGCGTAGCCGCCGCCGCCGAACTTGCC10.32786885245901637No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATGTATTAAAACCAAAAACTT10.32786885245901637No Hit
ACGCCGTATAGGCCACCCGAGACCTTATAGGCGTTGTCGTTCGACTTATT10.32786885245901637No Hit
AGCCTAGACATCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCTT10.32786885245901637No Hit
AGCCTAGACATCCACTGCTGAAGGTTGTTATCTAGTTAAAAGCAAGGACT10.32786885245901637No Hit
ACGCCGTGTAGGCCGCCTGAGTGCAGATACGCGTCCTTCTCGAACTTTCC10.32786885245901637No Hit
AGCCTAGACATCCACTGCTGGAAGTTGTTATGGATTAAAACCAAAAACTT10.32786885245901637No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGAATT10.32786885245901637No Hit
AGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGAAAGT10.32786885245901637No Hit
ACGCCGTGTAGACCGCCGGATACCTTGTAGGCATTGGCGTCGGAGGTGTT10.32786885245901637No Hit
ACACCGTGTAACCCGCCAGAGACCTTGTACGCGTTCTCGTCGTTGGTGTT10.32786885245901637No Hit
ACGCCGTGCAAGCCACCGGATGCCGCATACGACCCCGAGCCGAACTTGCC10.32786885245901637No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGT10.32786885245901637No Hit
AGCCTAGACATCCACTGCTGAAGGTTGTTATCTAGAATAAAAGTAGAGAC10.32786885245901637No Hit
ACCCCATGAAGACCGCCTGACACCGCGTAGGAGTCCGAGTCGAACTTGCC10.32786885245901637No Hit
AGCCTAGACATACACTGCTGAAAGTTGTATCTAGAATAAAAGTAGAGACT10.32786885245901637No Hit
ACCCCATGCAGGCCGCCCGACACCTTGTAGCCACCGTCGGGGCCGCCGAA10.32786885245901637No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGGTCCGTTGTTGAAAGT10.32786885245901637No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGAAGAGAC10.32786885245901637No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCACTGTCTCT10.32786885245901637No Hit
ACGCCATGGAATCCGCCAGACACGGCGTAGGCGCCGCCGCCGAACTTGCC10.32786885245901637No Hit
AGCCTAGACATCCACTGCTGCCGACGACGTGGTAATAATCCTTCCGCTGT10.32786885245901637No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTATAATAACAGTAGAGAC10.32786885245901637No Hit
ACACCATGGAGTCCTCCGGACACCTTGTAGGCGTTGTCGTCGGAAGTGTT10.32786885245901637No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAAGGACT10.32786885245901637No Hit
AGCCTAGCATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGAGACT10.32786885245901637No Hit
ACGCCGTGGAGGCCACCTGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC10.32786885245901637No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAAAATAAAAGTAGAGAC10.32786885245901637No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTACCTAGTTAAAAGCAAGGACT10.32786885245901637No Hit
AGCCTAGACATCCACTGCTGTCTCGGGTAATGATCCTTCCGCTGTCTCTT10.32786885245901637No Hit
ACCCCCTGCATGCCCTGATGGGGCATAATCTCTGTCGGGGCATTTGCCGC10.32786885245901637No Hit
ACTCCATGTAGACCACCCGAGACCTTGTAGCCGCCGCCGCCGAACTTGCC10.32786885245901637No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGTAAAGAC10.32786885245901637No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATGGACTAAAACCAAAAACTT10.32786885245901637No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTACTGATCCTTCCGCTGTCTCT10.32786885245901637No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGT10.32786885245901637No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT10.32786885245901637No Hit
ACCCCATGAAATCCGCCGGAGACGCCGTAGCTCTTGCCGTCGAACTTCCC10.32786885245901637No Hit
ACACCATGAAGGCCGCCGGACACCTTGTAGCCGCCGCCGCCGAACTTGCC10.32786885245901637No Hit
ACGCCGTGCAGACCGCCTGACACCTTGTAGGAATTCTGGTCGAACTTGCC10.32786885245901637No Hit
AGCCTAGACATCCTCTGCTGAAAGTTGTTATGGATTAAAACCAAAACTTT10.32786885245901637No Hit
ACGCCGTGCAAGCCGCCCGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC10.32786885245901637No Hit
ACCCCGTGAAGGCCGCCTGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC10.32786885245901637No Hit
AGCCTAGACATCCACTGCTGAAAGTCGTTATCTAGAATAAAAGTAGAGAC10.32786885245901637No Hit
ACTCCGTGAAAGCCGCCCGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC10.32786885245901637No Hit
ACGCCATGAAGGCCTCCGGACACCTTGTAGCTGTCGTTGTCGAACTTGCC10.32786885245901637No Hit
AGCCTAGCATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCTT10.32786885245901637No Hit
GCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGAGACT10.32786885245901637No Hit
ACGCCGTGGAGTCCACCGGATACCTTGTAGGCGTTATCGTCGCTGGTGTT10.32786885245901637No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACT10.32786885245901637No Hit
AGCCTAGACATCCACTGCTGAAGGTTGTTATGGATTAAAACCAAAAACTT10.32786885245901637No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGAGTC10.32786885245901637No Hit
AGCCTACACATCCACTCCATGAAGGTGCTAACAAGACCAAAAGCAGAGAC10.32786885245901637No Hit
AGCCTAGACATCCACTGCTGTCTTGTGGTAATGATCCTTCCGCTGTCTCC10.32786885245901637No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)