FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n02_repeat-ITS-OOChi735.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n02_repeat-ITS-OOChi735.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9577
Sequences flagged as poor quality0
Sequence length301
%GC42

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGACTT595462.16978176882113No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGAACT105411.005534092095646No Hit
AGCCTAGACATCCACTGCTGAAAGCTGTTATTGATTAAAACCAAAGACTT1441.5036023807037695No Hit
AGCCTAGACATCCACTGCTGGTGGTAATGATCCTTCCGCTGTCTCTTATA1341.399185548710452No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTAAGGTTAAAACCAAAGACTTT1121.169468518325154No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGGCTT630.6578260415578991No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAGAACCAAAGACTT560.584734259162577No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGAATAAAACCAAAGACTT450.46987574396992793No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGAGTAAAACCAAAGACTT430.4489923775712645No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAGGACTT390.4072256447739376No Hit
AGCCTAGACATCCACTGCTGAAGGTTGTTATTGATTAAAACCAAAGACTT380.3967839615746058No Hit
AGACTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGACTT380.3967839615746058No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCGAAGACTT330.3445755455779471No Hit
AGCCTAGACATCCACTGCTGAAAGTCGTTATTGATTAAAACCAAAGACTT320.3341338623786154No Hit
AGCCTAGACATCCACTGCTAAAAGTTGTTATTGATTAAAACCAAAGACTT320.3341338623786154No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAGCCAAAGACTT290.3028088127806202No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGACTC280.2923671295812885No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGGTTAAAACCAAAGACTT270.28192544638195677No Hit
AGCCTAGACATCCACTGCTGGAAGTTGTTATTGATTAAAACCAAAGACTT260.27148376318262507No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGACTAAAACCAAAGACTT260.27148376318262507No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGAATT250.2610420799832933No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCGATTAAAACCAAAGACTT240.25060039678396157No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATTGATTAAAACCAAAGACTT220.22971703038529812No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAGAGACTT220.22971703038529812No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGACCT200.20883366398663467No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAACGACTT190.1983919807873029No Hit
AGCCTAGACATCCACTGCTGAAAGTTATTATTGATTAAAACCAAAGACTT190.1983919807873029No Hit
AGCCTAGACATCCACTGCTGAGAGTTGTTATTGATTAAAACCAAAGACTT170.17750861438863946No Hit
CGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGACTT160.1670669311893077No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTTATTAAAACCAAAGACTT160.1670669311893077No Hit
AGCCTAGACATCCACTGCTGACAGTTGTTATTGATTAAAACCAAAGACTT160.1670669311893077No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTACTGATTAAAACCAAAGACTT160.1670669311893077No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACAAAAGACTT150.15662524798997599No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAGACCAAAGACTT140.14618356479064426No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTTGATTAAAACCAAAGACTT140.14618356479064426No Hit
AGCCTAGACATACACTGCTGAAAGTTGTTATTGATTAAAACCAAAGACTT140.14618356479064426No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTAATTAAAACCAAAGACTT140.14618356479064426No Hit
AGCCTAGACATCCACTGCTGAAAGTTGGTATTGATTAAAACCAAAGACTT130.13574188159131254No Hit
AGCCTAGACATCCACTGCTGACGAGTGGTAATGATCCTTCCGCTGTCTCT120.12530019839198078No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTACAACCAAAGACTT110.11485851519264906No Hit
AGCCTAGACATCCCCTGCTGAAAGTTGTTATTGATTAAAACCAAAGACTT110.11485851519264906No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCCAAGACTT100.10441683199331733No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTGAAACCAAAGACTT100.10441683199331733No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGCCTT100.10441683199331733No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)