FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n02_repeat-ITS-OOChi724.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n02_repeat-ITS-OOChi724.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2013
Sequences flagged as poor quality0
Sequence length301
%GC42

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTCAAAGCAAGAACT94346.8455042225534No Hit
AGCCTAGACATCCACTGCTGTGGTAATGATCCTTCCGCTGTCTCTTATAC33416.592151018380527No Hit
AGCCTAGACATCCACTGCTGTCTGTGGTAATGATCCTTCCGCTGTCTCTT1949.637357178340784No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATTTAATTAAAAGCAAGAATT582.8812717337307503No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTTAAAGCAAGAACT90.44709388971684055No Hit
AGCCTAGACATCCACTGCTGTCTGTGGTAATGATACTTCCGCTGTCTCTT90.44709388971684055No Hit
AGCCTAGACATCCACTGCTGTGGTAATGATCCTTGCGCTGTCTCTTATAC90.44709388971684055No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAAGCAGAGACTT90.44709388971684055No Hit
AGCCTAGACATCCACTGCTGAAGGTTGCTATCTAGTTCAAAGCAAGAACT80.39741679085941384No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT80.39741679085941384No Hit
AGCCTAGACATCCACTGCTGTGGTAATGATCCTTACGCTGTCTCTTATAC80.39741679085941384No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTCCAAAGCAAGAACT80.39741679085941384No Hit
AGCCTAGACATCCACTGCTGCCGACGGTGGTAATGATCCTTCCGCTGTCT80.39741679085941384No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAATTCAAAGCAAGAACT70.34773969200198707No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCAAGTTCAAAGCAAGAACT70.34773969200198707No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC50.24838549428713363No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGAGAC50.24838549428713363No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT50.24838549428713363No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTCGAAGCAAGAACT50.24838549428713363No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCGAGTTCAAAGCAAGAACT40.19870839542970692No Hit
AGCCTAGACATCCACTGCTAAAAGTTGCTATCTAGTTCAAAGCAAGAACT40.19870839542970692No Hit
AGCCTAGACATCCACTGCTGAAAGCTGCTATCTAGTTCAAAGCAAGAACT40.19870839542970692No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTCAAGGCAAGAACT40.19870839542970692No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTCAAAGCAAGAACC40.19870839542970692No Hit
AGCCTAGACATCCACTGCTTAAAGTTGCTATCTAGTTCAAAGCAAGAACT30.14903129657228018No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTCAAAGCAGGAACT30.14903129657228018No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTACCTAGTTCAAAGCAAGAACT30.14903129657228018No Hit
AGCCTAGACATCCACTGCTGGAAGTTGCTATCTAGTTCAAAGCAAGAACT30.14903129657228018No Hit
AGCCTAGACATCCACTGCTGTGGTAATGATCCTTCCGCTGTCTCTTATAA30.14903129657228018No Hit
AGCCTATACATCCACTGCTGAAAGTTGCTATCTAGTTCAAAGCAAGAACT30.14903129657228018No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATTTAATTAAAAGCAAGGATT30.14903129657228018No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATTTAACTAAAAGCAAGAATT30.14903129657228018No Hit
AGCCTAGACATCCACTGCTGTGGTAATGATCCTTCCGCTGCCTCTTATAC30.14903129657228018No Hit
AGCCTAGACATCCACTGCTGTGGTAATGAACCTTCCGCTGTCTCTTATAC30.14903129657228018No Hit
AGCCTAGACATCTACTGCTGAAAGTTGCTATCTAGTTCAAAGCAAGAACT30.14903129657228018No Hit
AGCCTAGACATCCACTGCTGTCTGTGGTATGATCCTTCCGCTGTCTCTTA30.14903129657228018No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCCATCTAGTTCAAAGCAAGAACT30.14903129657228018No Hit
AGCCTAGACATCCACTGCTGTCTGTGGTAATGATGCTTCCGCTGTCTCTT30.14903129657228018No Hit
AGCCTAGACATCCACTGCTTTGGTAATGATCCTTCCGCTGTCTCTTATAC30.14903129657228018No Hit
ATCGGACACGTTCAACCCGTCGGCTACCAGCAATTGCTGGGCCTTGAGCA30.14903129657228018No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGTAATGATCCTTCCGCTGTCTC30.14903129657228018No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTCAAAGCAAGAACT30.14903129657228018No Hit
AGCCTAGACATCCACTGCTGTGGTAATGATCCTTCTGCTGTCTCTTATAC30.14903129657228018No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTATTTCAAAGCAAGAACT30.14903129657228018No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGAAAGT30.14903129657228018No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGCTCAAAGCAAGAACT30.14903129657228018No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)