FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n02_repeat-ITS-OOChi697.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n02_repeat-ITS-OOChi697.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20198
Sequences flagged as poor quality0
Sequence length301
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTT1087053.817209624715325No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGAGAC378718.74938112684424No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAGAGACT7913.9162293296365975No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACT7453.688484008317655No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC1340.6634320229725715No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT820.4059807901772453No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACCTT670.33171601148628577No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAGAAACTTT620.30696108525596594No Hit
AGCCTAGACATCCACTGCTAAAAGTTTGTGGAAGTAAACGCAAAAACTTT580.2871571442717101No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAGACTTT580.2871571442717101No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT540.2673532032874542No Hit
AGCCTAGACATCCACTGCTGAGAGTTTGTGGAAGTAAACGCAAAAACTTT530.26240221804139024No Hit
AGCCTAGACATCCACTGCTGAAGGTTTGTGGAAGTAAACGCAAAAACTTT510.25250024754926226No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTC510.25250024754926226No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGCAAACGCAAAAACTTT490.24259827705713438No Hit
CGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTT480.2376472918110704No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAGCGCAAAAACTTT460.22774532131894248No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAGGTAAACGCAAAAACTTT450.2227943360728785No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGAAAACGCAAAAACTTT420.2079413803346866No Hit
AGCCTAGACATCCACTGCTGAAAGTTCGTGGAAGTAAACGCAAAAACTTT420.2079413803346866No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTCT420.2079413803346866No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGCGGAAGTAAACGCAAAAACTTT410.20299039508862265No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAGACGCAAAAACTTT400.19803940984255866No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTATAATAAAAGTAGAGAC380.18813743935043073No Hit
AGCCTAGACATCCACTGCTGAAAGTCTGTGGAAGTAAACGCAAAAACTTT380.18813743935043073No Hit
AGCCTAGACATCCACTGCTGGAAGTTTGTGGAAGTAAACGCAAAAACTTT360.1782354688583028No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCGAAAACTTT350.17328448361223883No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAGAACTTT350.17328448361223883No Hit
AGCCTAGACATCCACTGCTGAAAGTTTTTGGAAGTAAACGCAAAAACTTT340.16833349836617487No Hit
AGCCTAGACATCCACTGCTGAAGGTTGTTATCTAGAATAAAAGTAGAGAC320.15843152787404693No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGGAGTAAACGCAAAAACTTT320.15843152787404693No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAGCTTT280.13862758688979107No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT280.13862758688979107No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGGAAACGCAAAAACTTT280.13862758688979107No Hit
AGCCTAGACATCCACTGCTGAAAGCTTGTGGAAGTAAACGCAAAAACTTT270.1336766016437271No Hit
AGCCTAGACATCCACTGCTGCCGACGAGTGGTAATGATCCTTCCGCTGTC250.12377463115159917No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGGGAC240.1188236459055352No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAGGTAGAGAC240.1188236459055352No Hit
AGCCTAGACATCCACTGCTGAAAATTTGTGGAAGTAAACGCAAAAACTTT230.11387266065947124No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGGATAAAAGTAGAGAC230.11387266065947124No Hit
AGCCTAGACATCCACTGCTGAAAGTTGGTGGAAGTAAACGCAAAAACTTT220.10892167541340728No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACACAAAAACTTT210.1039706901673433No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)