FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n02_repeat-ITS-OOChi692.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n02_repeat-ITS-OOChi692.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2041
Sequences flagged as poor quality0
Sequence length301
%GC42

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGACTT122560.01959823615874No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC30014.698677119059283No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT643.135717785399314No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGTAATGATCCTTCCGCTGTCTC371.8128368446839782No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT291.4208721215090643No Hit
AGCCTAGACATCCACTGCTGAGTGGTAATGATCCTTCCGCTGTCTCTTAT180.8819206271435571No Hit
AGCCTAGACATCCACTGCTGATGTGGTAATGATCCTTCCGCTGTCTCTTA170.8329250367466928No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGACTAAAACCAAAGACTT90.44096031357177856No Hit
AGCCTAGACATCCACTGCTGTGGTAATGATCCTTCCGCTGTCTCTTATAC80.39196472317491426No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAGGACTT70.34296913277804997No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGGCTT70.34296913277804997No Hit
AGCCTAGACATCCACTGCTGAGAGTTGTTATTGATTAAAACCAAAGACTT60.29397354238118567No Hit
AGCCTAGACATCCACTGCTGAAGGTTGTTATTGATTAAAACCAAAGACTT60.29397354238118567No Hit
CGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGACTT60.29397354238118567No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAGCCAAAGACTT50.2449779519843214No Hit
AGCCTAGACATCCACTGCTGGAAGTTGTTATTGATTAAAACCAAAGACTT50.2449779519843214No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGGTTAAAACCAAAGACTT50.2449779519843214No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAGAACCAAAGACTT50.2449779519843214No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAATGACTT50.2449779519843214No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGAGAC40.19598236158745713No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATGGATTAAAACCAAAGACTT40.19598236158745713No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGAGTAAAACCAAAGACTT40.19598236158745713No Hit
AGCCTAGACATCCACTGCTAAAAGTTGTTATTGATTAAAACCAAAGACTT40.19598236158745713No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCGAAGACTT40.19598236158745713No Hit
ATCGGACACGTTCAACCATAGGCTCCATGATATCTGAAGAGCTAGTAAAC40.19598236158745713No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATCAAAACCAAAGACTT30.14698677119059284No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTATAATAAAAGCAGAGAC30.14698677119059284No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCGGAGAC30.14698677119059284No Hit
AGCCTGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGACTTT30.14698677119059284No Hit
AGCCTAGACATCCACTGCTGTCGTGGCAGCGTCAGATGTGGTAATGATCC30.14698677119059284No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAGAGACTT30.14698677119059284No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGAATAAAACCAAAGACTT30.14698677119059284No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCGATTAAAACCAAAGACTT30.14698677119059284No Hit
CGGCTGCGTTCTTCATCGATGTCAGAACCAAGAGATCCGCTGTTGAAAGT30.14698677119059284No Hit
AGCCTAGACATCCACTGCTGTCTCTTATACACATCTGACGCTGCCGACGA30.14698677119059284No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)