FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n02_repeat-ITS-OOChi689.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n02_repeat-ITS-OOChi689.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences30085
Sequences flagged as poor quality0
Sequence length301
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTT1910263.49343526674423No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGAGAC392113.033072959946818No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACT9283.0845936513212564No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT2110.7013461858068805No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC1470.48861558916403525No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAGGTAAACGCAAAAACTTT1130.3756024596975237No Hit
AGCCTAGACATCCACTGCTGAGAGTTTGTGGAAGTAAACGCAAAAACTTT1080.3589828818348014No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACCTT1060.3523350506897125No Hit
AGCCTAGACATCCACTGCTGAAGGTTTGTGGAAGTAAACGCAAAAACTTT930.30912414824663453No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT920.30580023267409007No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTC920.30580023267409007No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAGAAACTTT820.2725610769486455No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGGAGTAAACGCAAAAACTTT810.26923716137610104No Hit
AGCCTAGACATCCACTGCTGAAAGCTTGTGGAAGTAAACGCAAAAACTTT800.2659132458035566No Hit
AGCCTAGACATCCACTGCTGAAAGTTCGTGGAAGTAAACGCAAAAACTTT760.25261758351337876No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCGAAAACTTT750.24929366794083432No Hit
AGCCTAGACATCCACTGCTGGAAGTTTGTGGAAGTAAACGCAAAAACTTT740.24596975236828986No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTCT740.24596975236828986No Hit
AGCCTAGACATCCACTGCTGAAAGTCTGTGGAAGTAAACGCAAAAACTTT730.2426458367957454No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAGCGCAAAAACTTT720.23932192122320092No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGCAAACGCAAAAACTTT720.23932192122320092No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGTAATGATCCTTCCGCTGTCTC710.23599800565065648No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAGAACTTT680.2260262589330231No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAGACGCAAAAACTTT660.21937842778793418No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGGAAACGCAAAAACTTT660.21937842778793418No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGAAAACGCAAAAACTTT620.20608276549775634No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGCGGAAGTAAACGCAAAAACTTT610.20275884992521193No Hit
AGCCTAGACATCCACTGCTAAAAGTTTGTGGAAGTAAACGCAAAAACTTT590.19611101878012296No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAGACTTT590.19611101878012296No Hit
AGCCTAGACATCCACTGCTGAAAGTTTTTGGAAGTAAACGCAAAAACTTT570.18946318763503409No Hit
AGCCTAGACATCCACTGCTGTCTGTGGTAATGATCCTTCCGCTGTCTCTT570.18946318763503409No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACACAAAAACTTT530.17616752534485625No Hit
AGCCTAGACATCCACTGCTGAAAGTTGGTGGAAGTAAACGCAAAAACTTT510.1695196941997673No Hit
CGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTT510.1695196941997673No Hit
AGCCTAGACATCCACTGCTGGAGATGTGGTAATGATCCTTCCGCTGTCTC450.1495762007645006No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACTCAAAAACTTT400.1329566229017783No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAGCTTT370.12298487618414493No Hit
AGCCTAGACATCTACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTT340.11301312946651156No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAAGCAGGGACTT330.10968921389396709No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTAGAAGTAAACGCAAAAACTTT320.10636529832142264No Hit
AGCCTAGACATCCACTGCTGGAGAGTGGTAATGATCCTTCCGCTGTCTCT320.10636529832142264No Hit
AGCCTAGACATCCACTGCTTAAAGTTTGTGGAAGTAAACGCAAAAACTTT310.10304138274887817No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)