FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n02_repeat-ITS-OOChi688.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n02_repeat-ITS-OOChi688.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21579
Sequences flagged as poor quality0
Sequence length301
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTT1812683.99833171138607No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAGGTAAACGCAAAAACTTT950.4402428286760276No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT930.4309745585986376No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTCT910.42170628852124753No Hit
AGCCTAGACATCCACTGCTGAAGGTTTGTGGAAGTAAACGCAAAAACTTT860.3985356133277724No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACCTT830.3846332082116873No Hit
AGCCTAGACATCCACTGCTAAAAGTTTGTGGAAGTAAACGCAAAAACTTT820.3799990731729923No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAGCGCAAAAACTTT820.3799990731729923No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAGAAACTTT810.3753649381342972No Hit
AGCCTAGACATCCACTGCTGAGAGTTTGTGGAAGTAAACGCAAAAACTTT760.3521942629408221No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTC740.34292599286343206No Hit
AGCCTAGACATCCACTGCTGAAAGTTCGTGGAAGTAAACGCAAAAACTTT720.333657722786042No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGGAGTAAACGCAAAAACTTT720.333657722786042No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCGAAAACTTT710.32902358774734697No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGAAAACGCAAAAACTTT700.32438945270865194No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGCAAACGCAAAAACTTT690.3197553176699569No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAGACGCAAAAACTTT680.3151211826312619No Hit
AGCCTAGACATCCACTGCTGGAAGTTTGTGGAAGTAAACGCAAAAACTTT660.3058529125538718No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGGAAACGCAAAAACTTT660.3058529125538718No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAGACTTT620.2873163723990917No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGCGGAAGTAAACGCAAAAACTTT610.28268223736039666No Hit
AGCCTAGACATCCACTGCTGAAAGCTTGTGGAAGTAAACGCAAAAACTTT600.27804810232170163No Hit
AGCCTAGACATCCACTGCTGAAAGTCTGTGGAAGTAAACGCAAAAACTTT600.27804810232170163No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAGAACTTT570.26414569720561654No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAGCTTT550.25487742712822653No Hit
AGCCTAGACATCCACTGCTGAAAGTTGGTGGAAGTAAACGCAAAAACTTT340.15756059131563094No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACACAAAAACTTT310.14365818619954585No Hit
AGCCTAGACATCCACTGCTGAAAGTTTTTGGAAGTAAACGCAAAAACTTT270.12512164604476575No Hit
AGCCTAGACATCCACTGCTGAAAGTTTATGGAAGTAAACGCAAAAACTTT250.11585337596737569No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAATAAACGCAAAAACTTT250.11585337596737569No Hit
AGCCTAGACATCTACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTT220.10195097085129061No Hit
AGCCTAGACATCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTTC220.10195097085129061No Hit
AGCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTTC220.10195097085129061No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTAGAAGTAAACGCAAAAACTTT220.10195097085129061No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)