FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n02_repeat-ITS-OOChi685.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n02_repeat-ITS-OOChi685.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10639
Sequences flagged as poor quality0
Sequence length301
%GC47

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT768872.26243067957515No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT2182.049064761725726No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTAATAATAATCCAATTTACCCAG1851.7388852335745841No Hit
AGCCTAGACATCCACTGCTGGAGTGGTAATGATCCTTCCGCTGTCTCTTA1161.090328038349469No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGAGAC660.620359056302284No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAAGCAGGGACTT590.5545633988156782No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTCT510.4793683616881286No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAGGCAAGGACTTT490.46056960240624123No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTC420.39477394491963536No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACCTT410.3853745652786916No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTGTAAATAAAAGCAAGGACTTT400.3759751856377479No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAGTAAAAGCAAGGACTTT390.3665758059968042No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAAGACTTT370.3477770467149168No Hit
AGCCTAGACATCCACTGCTGGATGTGGTAATGATCCTTCCGCTGTCTCTT370.3477770467149168No Hit
AGCCTAGACATCCACTGCTGAAGGTTGTTGTAAATAAAAGCAAGGACTTT370.3477770467149168No Hit
AGCCTAGACATCCACTGCTGGAAGTTGTTGTAAATAAAAGCAAGGACTTT370.3477770467149168No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTAAATAAAAGCAAGGACTTTCGT350.3289782874330294No Hit
CGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT340.31957890779208575No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAGAGCAAGGACTTT330.310179528151142No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAGATAAAAGCAAGGACTTT320.30078014851019835No Hit
AGCCTAGACATCCACTGCTGAGAGTTGTTGTAAATAAAAGCAAGGACTTT320.30078014851019835No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGAACTTT320.30078014851019835No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAGAAGCAAGGACTTT320.30078014851019835No Hit
AGCCTAGACATCCACTGCTGAAAGCTGTTGTAAATAAAAGCAAGGACTTT310.2913807688692546No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAGGGACTTT310.2913807688692546No Hit
AGCCTAGACATCCACTGCTAAAAGTTGTTGTAAATAAAAGCAAGGACTTT290.2725820095873672No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTCGTAAATAAAAGCAAGGACTTT290.2725820095873672No Hit
AGCCTAGACATCCACTGCTGAAAGTTTTGTAAATAAAAGCAAGGACTTTC270.2537832503054798No Hit
AGCCTAGACATCCACTGCTGAAAGTCGTTGTAAATAAAAGCAAGGACTTT260.24438387066453615No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAAGAAAAGCAAGGACTTT260.24438387066453615No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTGAATAAAAGCAAGGACTTT220.20678635210076135No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATGAAAGCAAGGACTTT220.20678635210076135No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAACAAAAGCAAGGACTTT210.19738697245981768No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCGAGGACTTT200.18798759281887395No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGGCTTT200.18798759281887395No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGCAAATAAAAGCAAGGACTTT180.16918883353698658No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAACAAGGACTTT170.15978945389604288No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAATCAAGGACTTT160.15039007425509918No Hit
AGCCTAGACATCCACTGCTGGTGTGGTAATGATCCTTCCGCTGTCTCTTA150.14099069461415548No Hit
AGCCTAGACATCTACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT150.14099069461415548No Hit
AGCCTATACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT140.13159131497321178No Hit
AGCCTAGATATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT130.12219193533226808No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAATGACTTT120.11279255569132438No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATTAAAGCAAGGACTTT120.11279255569132438No Hit
AGTCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT110.10339317605038068No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAAAAAAAGCAAGGACTTT110.10339317605038068No Hit
AGCCTAGACTCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTTC110.10339317605038068No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATACAAGCAAGGACTTT110.10339317605038068No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGAAAGGACTTT110.10339317605038068No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)