FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n02_repeat-ITS-OOChi684.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n02_repeat-ITS-OOChi684.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences56
Sequences flagged as poor quality0
Sequence length301
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC1730.357142857142854No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT1119.642857142857142No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGAGAC35.357142857142857No Hit
ACACCATGTAAGCCGCCCGACACCTTGCAGGAATTCTGGTCGAACTTACC23.571428571428571No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACT23.571428571428571No Hit
ACTCCGTGGAAACCGCCCGAGACCTTGTACGAGTTCTGGTCGAACTTGCC11.7857142857142856No Hit
ACTCCATGAAGTCCGCCGGAGACCGCGTAGCCGCCGCCGCCGAACTTGCC11.7857142857142856No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAGAGCAGAGAC11.7857142857142856No Hit
ACGCCGTGCAGGCCTCCGGAGGTCTTGTAGCCGGAGCCGCCGAACTTGCC11.7857142857142856No Hit
AGCCTAGACATCCACTGCTGAAAGTCTGTGGAAGAGAACGCAAAAACTTT11.7857142857142856No Hit
ACTCCGTGTAGGCCGCCGGACACCTTGTAGCCCTCGCCGCCGAACTTGCC11.7857142857142856No Hit
ACCCCATGGAATCCGCCCGAGACCGCGTAGGAGTAGCTGTCGAACTTGCC11.7857142857142856No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGAAAGT11.7857142857142856No Hit
ACTCCGTGGAGGCCGCCGGCGTGCAGTTCGGTCATGACGATTTCGGCGGC11.7857142857142856No Hit
ACGCCATGAAAGCCGCCGGACACCGCGTAGGAGTTGCTGTCGAACTTCCC11.7857142857142856No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT11.7857142857142856No Hit
AATCCATGACGGCAGCATGAGACCTTATAGGTGGTCAGAGTGAACTTGCC11.7857142857142856No Hit
ACGCCATGGAGGCCTCCTGAGACCTTGCAGGAATTCTGGTCGAACTTACC11.7857142857142856No Hit
AGCCTATACATCCACTGCTTGCTAGTCTAGTACTTTCTCTTCCTCCATGC11.7857142857142856No Hit
ACGCTGTGCAGTCCTCCAGAGACCTTGTAGGAGTTCTGGTCGAACTTACC11.7857142857142856No Hit
AGGCCGTAGACGCCTCCTGCGACCTTGTCAAAGTTATCGTTACTATTATT11.7857142857142856No Hit
ACGCCGTGCAGTCCGCCTGACACCTTATAGGCGTTGTCGTCGCTGCTGTT11.7857142857142856No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTATAATAAAAGCAGAGAC11.7857142857142856No Hit
CGGCTACGTTCTTCATCGCTCCCAGAACCAAGAGCTCCGGTGTTGACAGT11.7857142857142856No Hit
ACGCCGTGTAGGCCGCCTGAGACCTTGTACGCGTTCTCGTCCGAGGTGTT11.7857142857142856No Hit
ACGCCGTGCAAGCCGCCTGAGAAGCTGTAGGCGCCGCCCGAGCCCTTGTC11.7857142857142856No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)