FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n02_repeat-ITS-OOChi674.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n02_repeat-ITS-OOChi674.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences29840
Sequences flagged as poor quality0
Sequence length301
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAAGCAGGGACTT875929.353217158176943No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAGAGACT624620.93163538873995No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC530517.778150134048257No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACT27439.192359249329758No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGAGAC2390.8009383378016086No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATTTAGTAAAAGCAGGGACTT2290.767426273458445No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAAGCTT1620.5428954423592494No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT1310.4390080428954423No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAAGCAGAGACTT1190.3987935656836461No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAGGGACTT1080.36193029490616624No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTATCTAGAATAAAAGTAGAGACT980.3284182305630027No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAGGGACT740.2479892761394102No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAAGCAGGGAATT670.22453083109919572No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAGGCAGGGACTT600.20107238605898123No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT570.19101876675603216No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAGAAGCAGGGACTT540.18096514745308312No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAAGCAAGGACTT520.17426273458445038No Hit
AGCCTAGACATCCACTGCTGAAGGTTGCTATCTAGTAAAAGCAGGGACTT490.16420911528150134No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAAGCAGGGACCT450.15080428954423591No Hit
AGCCTAGACATCCACTGCTGAGAGTTGTTATCTAGTTAAAAGCAGAGACT430.14410187667560323No Hit
AGCCTAGACATCCACTGCTGGAGTGGTAATGATCCTTCCGCTGTCTCTTA430.14410187667560323No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAGGCAGAGACT430.14410187667560323No Hit
AGCCTAGACATCCACTGCTGAGAGTTGTTATCTAGAATAAAAGCAGAGAC420.14075067024128685No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTATAATAAAAGCAGAGAC410.13739946380697052No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGAATAAAAGCAGAGAC390.1306970509383378No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCCAGAATAAAATTAGAGAC390.1306970509383378No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAGAGCAGGGACTT380.12734584450402145No Hit
AGCCTAGACATCCACTGCTGAGAGTTGCTATCTAGTAAAAGCAGGGACTT370.1239946380697051No Hit
AGCCTAGACATCCACTGCTGAAGGTTGTTATCTAGTTAAAAGCAGAGACT370.1239946380697051No Hit
AGCCTAGACATCCACTGCTGAAAGCTGCTATCTAGTAAAAGCAGGGACTT360.12064343163538875No Hit
AGCCTAGACATCCACTGCTGAAAGTCGCTATCTAGTAAAAGCAGGGACTT360.12064343163538875No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAAGCATGGACTT360.12064343163538875No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGGGAC350.11729222520107238No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTATTAAAAGCAGGGACTT350.11729222520107238No Hit
AGCCTAGACATCCACTGCTAAAAGTTGCTATCTAGTAAAAGCAGGGACTT340.11394101876675602No Hit
AGCCTAGACATCCACTGCTAAAAGTTGTTATCTAGTTAAAAGCAGAGACT340.11394101876675602No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAAGCAGGGACTC330.11058981233243968No Hit
AGCCTAGACATCCACTGCTAAAAGTTGTTATCTAGAATAAAAGCAGAGAC320.10723860589812334No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTACCTAGTAAAAGCAGGGACTT320.10723860589812334No Hit
AGCCTAGACATCCACTGCTGAAGGTTGTTATCTAGAATAAAAGCAGAGAC310.10388739946380697No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAGAGGCT310.10388739946380697No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAGAGACC310.10388739946380697No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAAGCAGGGGCTT300.10053619302949061No Hit
AGCCTAGACATCCACTGCTGGAAGTTGCTATCTAGTAAAAGCAGGGACTT300.10053619302949061No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAGGCAGAGAC300.10053619302949061No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)