FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n02_repeat-ITS-OOChi669.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n02_repeat-ITS-OOChi669.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15015
Sequences flagged as poor quality0
Sequence length301
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT528635.204795204795204No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTTAAAGCAAGAACT217114.45887445887446No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT13739.144189144189143No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATTTAATTAAAAGCAAGAATT12678.438228438228439No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACT2801.8648018648018647No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGACTT1821.2121212121212122No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGAACT1400.9324009324009324No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT1180.7858807858807859No Hit
AGCCTAGACATCCACTGCTGACGAGTGGTAATGATCCTTCCGCTGTCTCT1140.7592407592407593No Hit
AGCCTAGACATCCACTGCTGGGGCTCGGAGATGTGGTAATGATCCTTCCG890.5927405927405928No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC740.49284049284049286No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTT580.3862803862803863No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAAGGACT450.2997002997002997No Hit
AGCCTAGACATACACTGCTGAAAGTTGTTATCTAGTTTAAAGCAAGAACT380.25308025308025306No Hit
AGCCTAGACATCCACTGCTAAAAGTTGTTATCTAGTTAAAAGCAAGGACT330.21978021978021978No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTTAAAGCAAGGACT260.17316017316017315No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGAATT260.17316017316017315No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATATAGTTTAAAGCAAGAACT260.17316017316017315No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTTAAAGCCAGAACT260.17316017316017315No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTACCTAGTTAAAAGCAAGGACT260.17316017316017315No Hit
AGCCTAGACATCCACTGCTGAAGGTTGTTATCTAGTTAAAAGCAAGGACT250.1665001665001665No Hit
AGCCTAGACATCCACTGCTGAGAGTTGTTATCTAGTTAAAAGCAAGGACT250.1665001665001665No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAGGCAAGGACT250.1665001665001665No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAGAAGCAAGGACT240.15984015984015984No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAGGGACT230.15318015318015318No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTATTTAAAAGCAAGGACT220.14652014652014653No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACC220.14652014652014653No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTGGTTAAAAGCAAGGACT210.13986013986013987No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCAAGTTTAAAGCAAGAACT210.13986013986013987No Hit
CGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTTAAAGCAAGAACT200.1332001332001332No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTGAAAGCAAGGACT190.12654012654012653No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAATTTAAAGCAAGAACT190.12654012654012653No Hit
AGCCTAGACATCCACTGCTGAAAGTCGTTATCTAGTTAAAAGCAAGGACT180.11988011988011987No Hit
AGCCTAGACATCCACTGCTGGAAGTTGTTATCTAGTTAAAAGCAAGGACT180.11988011988011987No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGGCT180.11988011988011987No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAGAGACT180.11988011988011987No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTCGTAAATAAAAGCAAGGACTTT180.11988011988011987No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCGAGGACT180.11988011988011987No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTTAAAGCAAGAACC170.11322011322011322No Hit
CGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT170.11322011322011322No Hit
AGCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACTT160.10656010656010656No Hit
AGCCTAGAAATCCACTGCTGAAAGTTGTTATCTAGTTTAAAGCAAGAACT160.10656010656010656No Hit
AGCCTAGACATCCACTGCTGAAAGCTGTTATCTAGTTAAAAGCAAGGACT160.10656010656010656No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGCTTAAAGCAAGAACT160.10656010656010656No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)