FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n02_repeat-ITS-OOATH608.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n02_repeat-ITS-OOATH608.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10062
Sequences flagged as poor quality0
Sequence length301
%GC51

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT823581.84257602862253No Hit
CGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT540.5366726296958855No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTC540.5366726296958855No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTATTAAGAGCAAGGACTT470.4671039554760485No Hit
AGCCTAGACATCCACTGCTAAAAGTTGTTATCTAGTAAGAGCAAGGACTT420.41741204531902204No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACCT360.35778175313059035No Hit
AGCCTAGACATCCACTGCTGGAAGTTGTTATCTAGTAAGAGCAAGGACTT320.3180282250049692No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTACCTAGTAAGAGCAAGGACTT300.2981514609421586No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAGGGACTT290.2882130789107533No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGGGCAAGGACTT270.26833631484794274No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAGAGCAAGGACTT260.2583979328165375No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAACAAGGACTT250.24845955078513218No Hit
AGCCTAGACATCCACTGCTGAAGGTTGTTATCTAGTAAGAGCAAGGACTT250.24845955078513218No Hit
AGCCTAGACATCCACTGCTGAAAGTCGTTATCTAGTAAGAGCAAGGACTT250.24845955078513218No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGGCTT240.2385211687537269No Hit
AGCCTAGACATCCACTGCTGAGAGTTGTTATCTAGTAAGAGCAAGGACTT230.22858278672232163No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAAGACTT230.22858278672232163No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCCAGTAAGAGCAAGGACTT230.22858278672232163No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTACTAAGAGCAAGGACTT220.21864440469091634No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAATAAGAGCAAGGACTT210.20870602265951102No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCAAGTAAGAGCAAGGACTT200.19876764062810573No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAGGAGCAAGGACTT200.19876764062810573No Hit
AGTCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT180.17889087656529518No Hit
AGCCTAGACATCCCCTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT180.17889087656529518No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTGAGAGCAAGGACTT170.16895249453388989No Hit
AGCCTAGACATCCACTGCTGAAAGCTGTTATCTAGTAAGAGCAAGGACTT170.16895249453388989No Hit
AGCCTAGACATCCACTGCTGACAGTTGTTATCTAGTAAGAGCAAGGACTT170.16895249453388989No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTGGTAAGAGCAAGGACTT170.16895249453388989No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCACGGACTT170.16895249453388989No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGCCTT160.1590141125024846No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCGAGGACTT160.1590141125024846No Hit
AGCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTTT150.1490757304710793No Hit
AGACTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT130.12919896640826875No Hit
AGCCTAGACATCTACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT120.11926058437686345No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGAATT120.11926058437686345No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTCATCTAGTAAGAGCAAGGACTT120.11926058437686345No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGAAAGGACTT110.10932220234545817No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)