FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n02_repeat-GyrBChi181.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n02_repeat-GyrBChi181.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5904
Sequences flagged as poor quality0
Sequence length301
%GC65

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGCCGTGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC140.23712737127371272No Hit
ACGCCGTGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC100.16937669376693767No Hit
ACGCCATGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC90.1524390243902439No Hit
ACGCCGTGTAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.13550135501355012No Hit
ACGCCGTGTAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.11856368563685636No Hit
ACGCCATGGAGGCCTCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.11856368563685636No Hit
ACGCCATGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC60.10162601626016261No Hit
ACTCCGTGCAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC60.10162601626016261No Hit
ACGCCGTGCAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC60.10162601626016261No Hit
ACGCCATGTAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC60.10162601626016261No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)