FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n02_repeat-GyrBChi141.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n02_repeat-GyrBChi141.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2730
Sequences flagged as poor quality0
Sequence length301
%GC65

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGCCGTGGAGGCCGCCCGACACCTTGTACGCATTGTCGTCCGACGTGTT50.18315018315018314No Hit
ACCCCGTGTAGGCCGCCCGACACCTTGTACGCATTGTCGTCCGACGTGTT40.14652014652014653No Hit
ACCCCGTGGAGACCGCCCGACACCTTGTACGCATTGTCGTCCGACGTGTT40.14652014652014653No Hit
ACGCCGTGCAGGCCGCCCGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC40.14652014652014653No Hit
ACGCCGTGGAGGCCTCCCGACACCTTGTACGCATTGTCGTCCGACGTGTT40.14652014652014653No Hit
ACGCCGTGTAGGCCGCCCGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC30.10989010989010989No Hit
ACGCCGTGGAGGCCGCCCGACACCTTGTAGCCGCCGCCGCCGAACTTGCC30.10989010989010989No Hit
ACGCCGTGAAGGCCTCCCGACACCTTGTACGCATTGTCGTCCGACGTGTT30.10989010989010989No Hit
ACGCCATGGAGGCCGCCCGACACCTTGTAGCCGCCGCCGCCGAACTTGCC30.10989010989010989No Hit
ACTCCGTGGAGGCCGCCGGAGACCTTGTAGCCGCCGCCGCCGAACTTGCC30.10989010989010989No Hit
ACCCCGTGGAGGCCGCCCGACACCTTGTACGCATTGTCGTCCGACGTGTT30.10989010989010989No Hit
ACGCCATGAAAGCCGCCGGACACCTTGTACGCATTGTCGTCCGACGTGTT30.10989010989010989No Hit
ACGCCGTGCAGGCCGCCCGACACCTTGTACGCATTGTCGTCCGACGTGTT30.10989010989010989No Hit
ACTCCGTGTAGGCCGCCCGACACCTTGTACGCATTGTCGTCCGACGTGTT30.10989010989010989No Hit
ACGCCGTGGAGGCCGCCCGAGACCTTGTAGCCGCCGCCGCCGAACTTGCC30.10989010989010989No Hit
ACTCCGTGGAGACCGCCCGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC30.10989010989010989No Hit
ACGCCGTGGAGGCCGCCAGATGCCGCGTACGAACCGCCGCCGAACTTGCC30.10989010989010989No Hit
ACTCCGTGGAGGCCGCCCGACACCTTGTACGCATTGTCGTCCGACGTGTT30.10989010989010989No Hit
ACTCCGTGGAGGCCGCCCGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC30.10989010989010989No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)