FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n02_repeat-GyrBChi122.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n02_repeat-GyrBChi122.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9407
Sequences flagged as poor quality0
Sequence length301
%GC64

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGCCGTGGAGGCCGCCGGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC150.15945572446050812No Hit
ACTCCGTGGAGGCCGCCTGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC110.11693419793770597No Hit
ACTCCGTGGAGGCCGCCGGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC100.10630381630700543No Hit
ACTCCATGGAGGCCGCCGGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC100.10630381630700543No Hit
ACGCCGTGCAGGCCGCCTGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC100.10630381630700543No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)