FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n02_repeat-GyrBChi117.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n02_repeat-GyrBChi117.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5848
Sequences flagged as poor quality0
Sequence length301
%GC65

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACTCCGTGGAGGCCGCCGGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC80.13679890560875513No Hit
ACCCCGTGGAGGCCGCCCGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC70.11969904240766074No Hit
ACGCCGTGGAGGCCGCCCGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC60.10259917920656635No Hit
ACTCCATGGAGGCCGCCCGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC60.10259917920656635No Hit
ACTCCGTGTAGGCCGCCCGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC60.10259917920656635No Hit
ACTCCGTGAAGGCCGCCTGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC60.10259917920656635No Hit
ACTCCATGCAAGCCGCCCGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC60.10259917920656635No Hit
ACACCGTGGAGGCCGCCTGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC60.10259917920656635No Hit
ACTCCATGTAGGCCGCCCGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC60.10259917920656635No Hit
ACACCGTGGAGGCCGCCGGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC60.10259917920656635No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)