FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n02_repeat-GyrBATH77.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n02_repeat-GyrBATH77.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4334
Sequences flagged as poor quality0
Sequence length301
%GC64

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACTCCGTGGAGGCCGCCGGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC100.23073373327180433No Hit
ACTCCGTGTAGGCCGCCGGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC100.23073373327180433No Hit
ACGCCGTGTAGGCCGCCGGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC80.18458698661744347No Hit
ACTCCGTGCAGGCCGCCGGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC80.18458698661744347No Hit
ACGCCGTGGAGGCCGCCGGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC80.18458698661744347No Hit
ACGCCATGGAGGCCGCCGGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC70.16151361329026304No Hit
ACTCCGTGTAGGCCGCCCGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC60.1384402399630826No Hit
ACTCCATGGAGGCCACCGGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC50.11536686663590216No Hit
ACTCCATGAAGTCCGCCGGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC50.11536686663590216No Hit
ACGCCGTGCAGGCCTCCGGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC50.11536686663590216No Hit
ACGCCGTGCAGGCCGCCTGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC50.11536686663590216No Hit
ACACCGTGAAGGCCACCGGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC50.11536686663590216No Hit
ACGCCATGTAGGCCGCCGGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC50.11536686663590216No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)