FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n02_repeat-GyrBATH61.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n02_repeat-GyrBATH61.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23157
Sequences flagged as poor quality0
Sequence length301
%GC64

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGCCGTGGAGGCCGCCGGACACCTTGTACGCATTGTCGTCCGACGTGTT550.23750917649090988No Hit
ACTCCGTGGAGGCCGCCGGACACCTTGTACGCATTGTCGTCCGACGTGTT370.15977890054843027No Hit
ACGCCGTGGAAGCCGCCGGACACCTTGTACGCATTGTCGTCCGACGTGTT360.1554605518849592No Hit
ACGCCATGGAGGCCGCCGGACACCTTGTACGCATTGTCGTCCGACGTGTT340.14682385455801703No Hit
ACTCCGTGTAGGCCGCCGGACACCTTGTACGCATTGTCGTCCGACGTGTT340.14682385455801703No Hit
ACGCCGTGCAGGCCGCCGGACACCTTGTACGCATTGTCGTCCGACGTGTT310.13386880856760375No Hit
ACGCCGTGTAGGCCGCCGGACACCTTGTACGCATTGTCGTCCGACGTGTT310.13386880856760375No Hit
ACGCCATGAAGGCCGCCGGACACCTTGTACGCATTGTCGTCCGACGTGTT280.12091376257719048No Hit
ACGCCGTGAAGGCCGCCGGACACCTTGTACGCATTGTCGTCCGACGTGTT280.12091376257719048No Hit
ACACCGTGCAGGCCGCCGGACACCTTGTACGCATTGTCGTCCGACGTGTT260.1122770652502483No Hit
ACGCCATGTAGGCCGCCGGACACCTTGTACGCATTGTCGTCCGACGTGTT260.1122770652502483No Hit
ACTCCATGGAGGCCGCCGGACACCTTGTACGCATTGTCGTCCGACGTGTT250.1079587165867772No Hit
ACACCGTGGAGGCCGCCGGACACCTTGTACGCATTGTCGTCCGACGTGTT250.1079587165867772No Hit
ACGCCGTGGAGACCGCCGGACACCTTGTACGCATTGTCGTCCGACGTGTT250.1079587165867772No Hit
ACCCCGTGGAGGCCGCCGGACACCTTGTACGCATTGTCGTCCGACGTGTT250.1079587165867772No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)