FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n02_repeat-GyrBATH53.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n02_repeat-GyrBATH53.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12711
Sequences flagged as poor quality0
Sequence length301
%GC63

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGCCGTGGAGGCCGCCGGACACCTTGTACGCATTGTCGTCCGACGTGTT490.3854928801825191No Hit
ACGCCGTGTAGGCCGCCGGACACCTTGTACGCATTGTCGTCCGACGTGTT280.22028164581858234No Hit
ACGCCATGGAGGCCGCCGGACACCTTGTACGCATTGTCGTCCGACGTGTT270.2124144441822044No Hit
ACACCGTGGAGGCCGCCGGACACCTTGTACGCATTGTCGTCCGACGTGTT250.19668004090944852No Hit
ACGCCGTGCAGGCCGCCGGACACCTTGTACGCATTGTCGTCCGACGTGTT220.1730784360003147No Hit
ACTCCGTGGAGGCCGCCGGACACCTTGTACGCATTGTCGTCCGACGTGTT210.16521123436393675No Hit
ACGCCGTGAAGGCCGCCGGACACCTTGTACGCATTGTCGTCCGACGTGTT190.14947683109118087No Hit
ACGCCGTGGAAGCCGCCGGACACCTTGTACGCATTGTCGTCCGACGTGTT190.14947683109118087No Hit
ACTCCGTGTAGGCCGCCGGACACCTTGTACGCATTGTCGTCCGACGTGTT180.14160962945480293No Hit
ACGCCGTGGAGACCGCCGGACACCTTGTACGCATTGTCGTCCGACGTGTT160.12587522618204705No Hit
ACGCCGTGGAGGCCGCCCGACACCTTGTACGCATTGTCGTCCGACGTGTT150.1180080245456691No Hit
ACGCCATGTAGGCCGCCGGACACCTTGTACGCATTGTCGTCCGACGTGTT150.1180080245456691No Hit
ACTCCATGAAGGCCGCCGGACACCTTGTACGCATTGTCGTCCGACGTGTT140.11014082290929117No Hit
ACTCCATGGAGGCCGCCGGACACCTTGTACGCATTGTCGTCCGACGTGTT130.10227362127291323No Hit
ACGCCGTGTAAGCCGCCGGACACCTTGTACGCATTGTCGTCCGACGTGTT130.10227362127291323No Hit
ACGCCATGCAAGCCGCCGGACACCTTGTACGCATTGTCGTCCGACGTGTT130.10227362127291323No Hit
ACGCCATGCAGGCCGCCGGACACCTTGTACGCATTGTCGTCCGACGTGTT130.10227362127291323No Hit
ACGCCGTGGAGTCCGCCGGACACCTTGTACGCATTGTCGTCCGACGTGTT130.10227362127291323No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)