FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n02_repeat-GyrBATH52.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n02_repeat-GyrBATH52.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13856
Sequences flagged as poor quality0
Sequence length301
%GC63

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGCCGTGGAGGCCGCCGGAGACCTTGTACGCGTTCTCGTCGCTGGTGTT270.19486143187066976No Hit
ACGCCGTGGAGGCCGCCGGAGACCTTGTAGGAGTTCTGGTCGAACTTACC260.18764434180138567No Hit
ACGCCGTGGAGGCCGCCGGAGACCTTGTAGGCGTTCTCGTCGTTGGTGTT240.17321016166281755No Hit
ACTCCGTGGAGGCCGCCGGAGACCTTGTAGGAGTTCTGGTCGAACTTACC210.15155889145496537No Hit
ACGCCGTGTAGGCCGCCGGAGACCTTGTACGCGTTCTCGTCGCTGGTGTT210.15155889145496537No Hit
ACGCCATGGAGGCCGCCGGAGACCTTGTACGCGTTCTCGTCGCTGGTGTT200.14434180138568128No Hit
ACGCCGTGCAGGCCGCCGGAGACCTTGTACGCGTTCTCGTCGCTGGTGTT170.1226905311778291No Hit
ACCCCGTGGAGGCCGCCGGAGACCTTGTACGCGTTCTCGTCGCTGGTGTT160.11547344110854503No Hit
ACTCCGTGGAGGCCGCCGGAGACCTTGTACGCGTTCTCGTCGCTGGTGTT150.10825635103926096No Hit
ACGCCGTGTAGGCCGCCGGAGACCTTGTAGGAGTTCTGGTCGAACTTACC150.10825635103926096No Hit
ACGCCATGGAGGCCGCCGGAGACCTTGTAGGAGTTCTGGTCGAACTTACC150.10825635103926096No Hit
ACGCCATGTAGGCCGCCGGAGACCTTGTACGCGTTCTCGTCGCTGGTGTT140.10103926096997691No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)