FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITSDve914.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITSDve914.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13161
Sequences flagged as poor quality0
Sequence length301
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTTCCGTAGGTG595445.23972342527164No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG343326.084644024010334No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTG190814.497378618646001No Hit
GGCTTGGTCATTTAGAGGAAGTAACTCGCATCGATGAAGAACGCAGCCGC2762.097105083200365No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTG1341.0181597143074235No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTTGGTG650.49388344350733226No Hit
GCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTTCCGTAGGTGA350.26593723881164044No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTCTCCGTTGGTG300.22794620469569182No Hit
GGCTTGGTCATTTAGAGGAAGTAAAGGTCATAACAAGGTTTCCGTAGGTG250.18995517057974318No Hit
GCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGA190.14436592964060482No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAGCAAGGTTTCCGTAGGTG190.14436592964060482No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGCCATAACAAGGTTTCCGTAGGTG190.14436592964060482No Hit
GCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGA190.14436592964060482No Hit
GGCTTGGTCATTTAGAGGAAGTAAAGGTCGTAACAAGGTTTCCGTAGGTG170.12916951599422538No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATACCAAGGTTTCCGTAGGTG170.12916951599422538No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAGGGTTTCCGTAGGTG160.12157130917103563No Hit
GGCTTGGTCATTTAGAGGAAGTAAGAGTCATAACAAGGTTTCCGTAGGTG160.12157130917103563No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGCTTCCGTAGGTG160.12157130917103563No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTTTCGTAGGTG150.11397310234784591No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTTCCGTAGGCG150.11397310234784591No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTACCAAGGTCTCCGTTGGTG140.10637489552465618No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTTACGTAGGTG140.10637489552465618No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTCTCCGTAGGTG140.10637489552465618No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)