FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITSDve886.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITSDve886.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences56
Sequences flagged as poor quality0
Sequence length301
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTG3155.35714285714286No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTTCCGTAGGTG1221.428571428571427No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG35.357142857142857No Hit
GGCTTGGTCATTTAGAGGAAGTAAGGAGCATCGATGAAGAACGCAGCCGC23.571428571428571No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTGACAAGGTCTCCGTAGGTG23.571428571428571No Hit
GGCTTGGCCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTG11.7857142857142856No Hit
CGTCCCGGGATGTATATCGGCGACACCGATGACGGCTCGGGCCTGCACCA11.7857142857142856No Hit
CGACCAGGAATGTATATAGGGGGCACGGACGAAAAGGCGCTGCATCACCT11.7857142857142856No Hit
AGGCCAGGGATGTACATTGGCTCCACCGGTGAGCGCGGCCTGCACCACCT11.7857142857142856No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGCAACAAGGTCTCCGTAGGTG11.7857142857142856No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTCGGTG11.7857142857142856No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)