FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITSDve883.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITSDve883.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20
Sequences flagged as poor quality0
Sequence length301
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG630.0No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTTCCGTAGGTG210.0No Hit
AGGCCCGCCATGTACATCGGCGACACCGACGATGGCTCCGGCCTGCATCA15.0No Hit
GGCTTGGTCATTTAGAGGAAGTAACTCGCATCGATGAAGAAGCAGCCGCT15.0No Hit
AGACCGGGGATGTACATTGGGTCGACCGGCGAGCGGGGCCTGCACCACCT15.0No Hit
CGTCCTGGAATTTACATCGGCTCGACCGGTGAGCGGGGCCTGCACCACCT15.0No Hit
CGTCCTGGGATGTATATCGGCGATACCGACGACGGCTCGGGCCTGCACCA15.0No Hit
CGACCCGCGATGTACATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG15.0No Hit
AGCCCTGCCATGTACATTGGTGGCACCGGTTCGGATGGGTTGTCCCACCT15.0No Hit
CGCCCAGCTATGTATATAGGGTCCACCGGTGAGCGCGGCCTGCACCACCT15.0No Hit
CGGCCTGGCATGTACATCGGCGACACGGGCATTAAGGGCCTGCACCATTT15.0No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGCAACAAGGTTTCCGTAGGTG15.0No Hit
AGCCCAGCAATGTATATTGGCGACACCGACGACGGGTCGGGCCTGCATCA15.0No Hit
AGCCCCGGGATGTACATTGGCGGCACGGACGAAAAGGCGCTGCATCATCT15.0No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)