FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITSDve492.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITSDve492.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences156
Sequences flagged as poor quality0
Sequence length301
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG11573.71794871794873No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTTCCGTAGGTG127.6923076923076925No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTG63.8461538461538463No Hit
GGCTTGGCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGA31.9230769230769231No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT21.282051282051282No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC21.282051282051282No Hit
GGCTTGGTCATTTAGAGGAAGTAAAGGTCGTAACAAGGTTTCCGTAGGTG10.641025641025641No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTTCGTAGGTG10.641025641025641No Hit
GTCTTGGTCATTTAAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGA10.641025641025641No Hit
GGCTTGGTCATTTAGAGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGA10.641025641025641No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACGAGGTTTCCGTAGGTG10.641025641025641No Hit
AGACCTGGGATGTACATCGGCGGCACGGACGAAAAGGCGCTGCATCATCT10.641025641025641No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTCGTTAT10.641025641025641No Hit
AGGCCCGGGATGTACATCGGGTCCACCGGTAAGACGGGCTTCCACCACCT10.641025641025641No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTACCAAGGTTTCCGTAGGTG10.641025641025641No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGGACTGCTCGTAATCTCG10.641025641025641No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA10.641025641025641No Hit
CGGAAGGATCATCACCACACCAAAAACTATCAACGTGAACCACTTTGTAT10.641025641025641No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAGC10.641025641025641No Hit
AGGCCTGGCATGTGCATCGGCGGCACGGACGAAAAGGCGCTGCATCATCT10.641025641025641No Hit
AGTCCGGGTATGTATATCGGCTCGACCGGTGAGCGGGGTCTGCACCACCT10.641025641025641No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACGGGGTCTCCGTAGGTG10.641025641025641No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)