FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITSChi474.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITSChi474.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14395
Sequences flagged as poor quality0
Sequence length301
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG825957.374088225078154No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTTCCGTAGGTG377226.20354289683918No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTG6244.334838485585273No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTG720.5001736714136853No Hit
GCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGA500.3473428273706148No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGCG440.305661688086141No Hit
GGCTTGGTCATTTAGAGGAAGTAAAGGTCGTAACAAGGTTTCCGTAGGTG390.27092740534907955No Hit
GGCTTGGTCATTTAGAGGAAGTAATCGTCGGCAGCATCGATGAAGAACGC350.24313997915943034No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTACCAAGGTTTCCGTAGGTG350.24313997915943034No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAGCAAGGTTTCCGTAGGTG330.22924626606460577No Hit
GCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTTCCGTAGGTGA310.21535255296978115No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGCTTCCGTAGGTG310.21535255296978115No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTTCGTAGGTG300.20840569642236886No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTCCCGTAGGTG290.20145883987495658No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAGGGTTTCCGTAGGTG250.1736714136853074No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACGAGGTTTCCGTAGGTG220.1528308440430705No Hit
GGCTTGGTCATTTAGAGGAAGTAACTCGCATCGATGAAGAACGCAGCCGC220.1528308440430705No Hit
GGCTTGGTCATTTAGAGGAAGTAAGAGTCGTAACAAGGTTTCCGTAGGTG220.1528308440430705No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTCTCCGTAGGTG210.14588398749565823No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTACGTAGGTG210.14588398749565823No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTCCCGTAGGTG200.13893713094824592No Hit
GGCTTGGTCATTTAGAGGAAGTAAAGGTCATAACAAGGTTTCCGTAGGTG200.13893713094824592No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGCAGGTG190.13199027440083363No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTA180.12504341785342132No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGCCGTAACAAGGTTTCCGTAGGTG180.12504341785342132No Hit
GGCTTGGTCATTTAGAGGAAGTAAGAGTCATAACAAGGTTTCCGTAGGTG170.11809656130600903No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTTCCGTAGGCG170.11809656130600903No Hit
GGCTTGGTCATTTAGAGGAAGTAAGTCTCTGGCCGAGTTATAAGAGACAC160.11114970475859674No Hit
GGCTTGGTTATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG150.10420284821118443No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)